Gene Strop_2395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2395 
Symbol 
ID5058858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2689384 
End bp2690169 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID640474654 
Producthypothetical protein 
Protein accessionYP_001159220 
Protein GI145594923 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00354329 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCATG ACTTCACGCG ATGGCTCCCG GCCATCGCGA AGACCCCGCA TCAATGGCTC 
TCGACAGAGC CGAACCGCAA GCTTGTCATG AGCGTGACGG GAGTGCTGGC AATTGGAGGT
CTCGCTCTCG CACCGACCAC CGCCGCGGCA TCGGTAACCA GTGGCCCGCA CACGGGCGCC
GTAGCCGCTA TCGAACTGGC CACCGGCCGC CAGGCCGCGG ACCCGGATCT TGAACCGGAA
CCAGCCCCTG AGCCGGACCG GACAGCGTCA ACCGCCGACG CGGACCGAGC CGTCGAGCCA
ACGGCAAGCG ACACCGAGGA CACCGCCCCG GCTCCGGCCG GCCCGCCCAG CCGTGAACAA
CTGATCCCCT ACGGCGTGCA GGGCGCCCAG TCCTACATCC AGGTTGACAA CGCCCAGCGC
GCGAACGCCA AGGAGATCAT CGAGGTCGCC AAGGCGACCG GGGTCGGCGA GCGGGGTGCG
GTTATCGGCG TGGCGACCGC GCTACAGGAG TCGAAGCTGT ACAACCTCGG CCACCTGGGC
AGCTACAACG ACCACGACTC GCAGGGCCTG TTCCAACAGC GCCCCTCGAC CGGGTGGGGC
ACGCCGGAGC AGATCACCGA CCCGCAGTAC GCCGCGACGG CGTTCTTCGA GGGTCTCAAG
AACGTCAACG GCTGGCAGCA GCTGCCGTTG ACCACCGCGG CCCAGACGGT GCAGGTGTCC
GCGTACCCGT TCCACTACGC CCAGTGGGAA GAGCAGGCAG CGGAGCTCGT CGCCGAGCTC
TGGTGA
 
Protein sequence
MKHDFTRWLP AIAKTPHQWL STEPNRKLVM SVTGVLAIGG LALAPTTAAA SVTSGPHTGA 
VAAIELATGR QAADPDLEPE PAPEPDRTAS TADADRAVEP TASDTEDTAP APAGPPSREQ
LIPYGVQGAQ SYIQVDNAQR ANAKEIIEVA KATGVGERGA VIGVATALQE SKLYNLGHLG
SYNDHDSQGL FQQRPSTGWG TPEQITDPQY AATAFFEGLK NVNGWQQLPL TTAAQTVQVS
AYPFHYAQWE EQAAELVAEL W