Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2395 |
Symbol | |
ID | 5058858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2689384 |
End bp | 2690169 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474654 |
Product | hypothetical protein |
Protein accession | YP_001159220 |
Protein GI | 145594923 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00354329 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCATG ACTTCACGCG ATGGCTCCCG GCCATCGCGA AGACCCCGCA TCAATGGCTC TCGACAGAGC CGAACCGCAA GCTTGTCATG AGCGTGACGG GAGTGCTGGC AATTGGAGGT CTCGCTCTCG CACCGACCAC CGCCGCGGCA TCGGTAACCA GTGGCCCGCA CACGGGCGCC GTAGCCGCTA TCGAACTGGC CACCGGCCGC CAGGCCGCGG ACCCGGATCT TGAACCGGAA CCAGCCCCTG AGCCGGACCG GACAGCGTCA ACCGCCGACG CGGACCGAGC CGTCGAGCCA ACGGCAAGCG ACACCGAGGA CACCGCCCCG GCTCCGGCCG GCCCGCCCAG CCGTGAACAA CTGATCCCCT ACGGCGTGCA GGGCGCCCAG TCCTACATCC AGGTTGACAA CGCCCAGCGC GCGAACGCCA AGGAGATCAT CGAGGTCGCC AAGGCGACCG GGGTCGGCGA GCGGGGTGCG GTTATCGGCG TGGCGACCGC GCTACAGGAG TCGAAGCTGT ACAACCTCGG CCACCTGGGC AGCTACAACG ACCACGACTC GCAGGGCCTG TTCCAACAGC GCCCCTCGAC CGGGTGGGGC ACGCCGGAGC AGATCACCGA CCCGCAGTAC GCCGCGACGG CGTTCTTCGA GGGTCTCAAG AACGTCAACG GCTGGCAGCA GCTGCCGTTG ACCACCGCGG CCCAGACGGT GCAGGTGTCC GCGTACCCGT TCCACTACGC CCAGTGGGAA GAGCAGGCAG CGGAGCTCGT CGCCGAGCTC TGGTGA
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Protein sequence | MKHDFTRWLP AIAKTPHQWL STEPNRKLVM SVTGVLAIGG LALAPTTAAA SVTSGPHTGA VAAIELATGR QAADPDLEPE PAPEPDRTAS TADADRAVEP TASDTEDTAP APAGPPSREQ LIPYGVQGAQ SYIQVDNAQR ANAKEIIEVA KATGVGERGA VIGVATALQE SKLYNLGHLG SYNDHDSQGL FQQRPSTGWG TPEQITDPQY AATAFFEGLK NVNGWQQLPL TTAAQTVQVS AYPFHYAQWE EQAAELVAEL W
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