| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2393 |
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| Symbol | |
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| ID | 5058856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2686175 |
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| End bp | 2687620 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474652 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159218 |
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| Protein GI | 145594921 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.74684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACC GCCCTCCCCC CGGTCCGCGG ACCTCCCCGC CCGGTGGTGA CCTGGCCGAA
CAACAACGCC GAGGGGCGGC GCTTGGCGTT GGTCTGGTCG CCGTATTCAT GACCTTGCTC
GACGTGAGCA TCGTCAACGT CGCCATCCCG TCGATGGAGC GGGCACTCGA TGTCGCCCCC
AGCGACGTGC AGTGGGTCCT GTCCGGCTAC GCGTTGACAT TCGGGTTGAT GCTGGTACCC
GCCGGCCGGT TCGGTGACGG GCATGGGCGA CGGACCGTAT TCGTCGTCGG CGTCGTCCTG
TTCAGCCTCA CCAGCGTGGC GGCCGGGCTT GCTCCCACCG CCACCTGGCT GGTCGCTGCC
CGCCTGCTCC AAGGCGCCGC CGCCGGCTTG GTCACCCCCC AGGTCACCGG ACTGGTCCAG
GAACTCTTTC CACGTTCCGA GCGGGGCCGC CCGTTCGGGC TGCTCGGCGC GACCGTCAGC
ATTTCCACGG CGATCGGGCC GTTGCTTGGC GGCCTCCTCA TCCACATCGG CGGGTCCGAG
CACGGGTGGC GGTGGGTCTT CTTCGTCAAC GTGCCGATCG GTATGTTCGC CGCCGTCCTC
GGCTGGCGCC TCTTCCCGCG CCACGCCCAG GGCGTTCCCG ACCGTCGCCG GTTCGATCCG
GTCGGGTTGC TACTGCTCGG CGCGGGTGTC CTACTTGTCC TCCTGCCCCT GGTCCAGCAG
CACTGGCAGG GTCCGACACG ATGGCTGACG CTCCCGGCCG GCCTGCTGAC ACTGGCTGCC
TTCGCCGGGT GGGAACGGTG GTACGCCCGC CGCCGCGAAC CCCTGTTCGA CCCACGTCTT
CTCGGCATCC GCTCATACCG GCTCGGCGTC CTGATCGCCC TGCTGTACTT CGGCGGGTTC
ACCTCGATCT TCTTCGTCCT CACGGTGTAC CTGCAGAACG GCCTCGGGCA CAGCGCACTC
GCCGCCGGGC TAGCCAGCAC TCCGTTCGCG GCTGGATTCG CCATCGCCTC CGTGGTGGGC
GGCCGGGTCG TCAACCGGGG TGGTCGGTCA CTGGTCGCCC TCGGACTGGC CACCGTCGCC
ATCAGCCTCG TCGTCGTGGT GCTCGTCGTC AACCGGGTCC CCACCGGCGC CACAGTGTCC
TGGTGGACCG CCACACCGCT GCTGGTGGCA GGACTCGGCA GCGGTCTGGT GGTCACCCCG
AACCAGGCCC TCACCCTCGC CCAGGTGCCG GTGCCGCAGG CGGGCAGCGG CGCGGGCATG
CTGGAAACCG GCCAGCGCAT CGGGTCCGCC GCCGGCATCG CCACGGTCGG CAGTGTCATC
TTCTCGGCCC AGGGGGCAAC CGGGGACTGG TTGGTCGCCT TCCACCATGC GATGCTCCTG
ATCAGCGGAA TCGCCGCGCT CGCGCTCTGC CTGGCGTTGA CCGACATCGT CCTCGACCGC
CGTTGA
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| Protein sequence | MGDRPPPGPR TSPPGGDLAE QQRRGAALGV GLVAVFMTLL DVSIVNVAIP SMERALDVAP
SDVQWVLSGY ALTFGLMLVP AGRFGDGHGR RTVFVVGVVL FSLTSVAAGL APTATWLVAA
RLLQGAAAGL VTPQVTGLVQ ELFPRSERGR PFGLLGATVS ISTAIGPLLG GLLIHIGGSE
HGWRWVFFVN VPIGMFAAVL GWRLFPRHAQ GVPDRRRFDP VGLLLLGAGV LLVLLPLVQQ
HWQGPTRWLT LPAGLLTLAA FAGWERWYAR RREPLFDPRL LGIRSYRLGV LIALLYFGGF
TSIFFVLTVY LQNGLGHSAL AAGLASTPFA AGFAIASVVG GRVVNRGGRS LVALGLATVA
ISLVVVVLVV NRVPTGATVS WWTATPLLVA GLGSGLVVTP NQALTLAQVP VPQAGSGAGM
LETGQRIGSA AGIATVGSVI FSAQGATGDW LVAFHHAMLL ISGIAALALC LALTDIVLDR
R
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