Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2388 |
Symbol | |
ID | 5058851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2681173 |
End bp | 2682054 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474647 |
Product | UspA domain-containing protein |
Protein accession | YP_001159213 |
Protein GI | 145594916 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTCGT CGAACGGCGC CGCGGTGGTA GTAGGCGTGG ACGGGTCCGA GCAGGCGCTG CGGGCCGTAC GCCTCGCGGC CGCCGAGGCC GCCCGTCGCA ACCGAATGCT GCGGGTCGTC CACGGCTTCA TCTGGCCGCT GCTCCACGTG CCGGTGGGAG CACCGCCCGG CGGACCGCCC GGATCGGGCC TCCGCCGCCA AGCGGAGCAG CTCGTCGCCG ACGCAGTCAC CGAAGCCGAA GCGACCGTCC CCGGCCTCCG CGTCTCCGGT GAGATCATCG ATGGCGAGGC CGCCGCCGTG TTGCTCGGCG AAGCACCAAA CGCCGTGCTG ATCGTGCTGG GCGACCGGGG TCTGGGCGGC TTCGCGGCCC TGGTCGTCGG CTCGGTCGCG GTACAGGTCG CCACCCACGC CGACTGCCCG GTCCTAGTCG CCCGCGGCAC GGAGCGCACC GAGGGGCCGA TAGTGGTCGG CGTGGACGGT TCCGCGGTGT CCTCCCCCGC CGTCGAGTTC GCTGCCGAAC AGGCGACGCT ACGCGGCAGC GAACTCGACG CGATACACGC CTACCGACAC CCGGTCGCCA GCGAACCCGG CGACATGCAG CCTCTCGTCT ACGACGAGAA GAAGCTGCGC CACGAGGAGC GCCGGATACT CGCCGAATCC GTCGCCGGGT TGGCCGAAAG GTGGCCGGAT CTCACCGTCC ACCAGCGGAC CGTCCGCGGC CGGCCCGCGC CGATCCTCAC CGAAGCATCC CGACAGGCCC AACTACTGGT GGTCGGTGGG CACGGACACG GAGCGCTCAC CGGTCTGCTG CTGGGCTCGG TCAGCCAGTC CGCGCTGCAC CACGCCGACT GCCCCGTCGC GGTCGTCCGC GCCCCAGGCT GA
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Protein sequence | MNSSNGAAVV VGVDGSEQAL RAVRLAAAEA ARRNRMLRVV HGFIWPLLHV PVGAPPGGPP GSGLRRQAEQ LVADAVTEAE ATVPGLRVSG EIIDGEAAAV LLGEAPNAVL IVLGDRGLGG FAALVVGSVA VQVATHADCP VLVARGTERT EGPIVVGVDG SAVSSPAVEF AAEQATLRGS ELDAIHAYRH PVASEPGDMQ PLVYDEKKLR HEERRILAES VAGLAERWPD LTVHQRTVRG RPAPILTEAS RQAQLLVVGG HGHGALTGLL LGSVSQSALH HADCPVAVVR APG
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