Gene Strop_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2388 
Symbol 
ID5058851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2681173 
End bp2682054 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID640474647 
ProductUspA domain-containing protein 
Protein accessionYP_001159213 
Protein GI145594916 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCGT CGAACGGCGC CGCGGTGGTA GTAGGCGTGG ACGGGTCCGA GCAGGCGCTG 
CGGGCCGTAC GCCTCGCGGC CGCCGAGGCC GCCCGTCGCA ACCGAATGCT GCGGGTCGTC
CACGGCTTCA TCTGGCCGCT GCTCCACGTG CCGGTGGGAG CACCGCCCGG CGGACCGCCC
GGATCGGGCC TCCGCCGCCA AGCGGAGCAG CTCGTCGCCG ACGCAGTCAC CGAAGCCGAA
GCGACCGTCC CCGGCCTCCG CGTCTCCGGT GAGATCATCG ATGGCGAGGC CGCCGCCGTG
TTGCTCGGCG AAGCACCAAA CGCCGTGCTG ATCGTGCTGG GCGACCGGGG TCTGGGCGGC
TTCGCGGCCC TGGTCGTCGG CTCGGTCGCG GTACAGGTCG CCACCCACGC CGACTGCCCG
GTCCTAGTCG CCCGCGGCAC GGAGCGCACC GAGGGGCCGA TAGTGGTCGG CGTGGACGGT
TCCGCGGTGT CCTCCCCCGC CGTCGAGTTC GCTGCCGAAC AGGCGACGCT ACGCGGCAGC
GAACTCGACG CGATACACGC CTACCGACAC CCGGTCGCCA GCGAACCCGG CGACATGCAG
CCTCTCGTCT ACGACGAGAA GAAGCTGCGC CACGAGGAGC GCCGGATACT CGCCGAATCC
GTCGCCGGGT TGGCCGAAAG GTGGCCGGAT CTCACCGTCC ACCAGCGGAC CGTCCGCGGC
CGGCCCGCGC CGATCCTCAC CGAAGCATCC CGACAGGCCC AACTACTGGT GGTCGGTGGG
CACGGACACG GAGCGCTCAC CGGTCTGCTG CTGGGCTCGG TCAGCCAGTC CGCGCTGCAC
CACGCCGACT GCCCCGTCGC GGTCGTCCGC GCCCCAGGCT GA
 
Protein sequence
MNSSNGAAVV VGVDGSEQAL RAVRLAAAEA ARRNRMLRVV HGFIWPLLHV PVGAPPGGPP 
GSGLRRQAEQ LVADAVTEAE ATVPGLRVSG EIIDGEAAAV LLGEAPNAVL IVLGDRGLGG
FAALVVGSVA VQVATHADCP VLVARGTERT EGPIVVGVDG SAVSSPAVEF AAEQATLRGS
ELDAIHAYRH PVASEPGDMQ PLVYDEKKLR HEERRILAES VAGLAERWPD LTVHQRTVRG
RPAPILTEAS RQAQLLVVGG HGHGALTGLL LGSVSQSALH HADCPVAVVR APG