| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2387 |
|---|
| Symbol | |
|---|
| ID | 5058850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2680207 |
|---|
| End bp | 2680815 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640474646 |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_001159212 |
|---|
| Protein GI | 145594915 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCAGC GGCCGGCTCG ATTTGGCACT CCGCACGCCT CCGGCCACCG CACCAATCAG
GTCCTCACGC TGCCGAACCT GATCAGCTTC GTCCGACTTC TCGGTGTTCC GGTCTTTCTC
TACCTACTGC TGGTGGCCCG CGCCGATGTC GCCGCGATCG TGGTGCTGGC GGTCGGCGGC
ACCACCGACT GGGTGGACGG CTGGGCCGCC CGGCGACTCC GGCAGGTGAG TCGGCTGGGC
GAGCTGCTTG ATCCATTCGT GGACCGCCTC TACATCCTGG CCACGCTGGT CGCGTTCACC
CTCCGGGAGG TGGTGCCGTG GCAGTTCACG GTGGCGCTGC TCGCCCGTGA GGTGCTGCTG
CTGGGTTCCC TCGGCACGTT ACGTCGCTAC GGGTACGGGC CGCCCCCGGT GCACTACGTG
GGCAAGACGG CGACATTTCT GTTGTTGGCC GCGTTCCCCA TCCTGTTGCT GGCGACGGCG
GTGCCGGCAA CAGTTGTCAG CGCGGTCGGC TGGAGCCTGG CCTGGTGGGG CCTGACGTTG
TACTGGGTCG CTGGCGCGAT GTACGTGGTG CAGGCCAGGC GGCTGGTGCG GGCAGCGAGG
GCACGATGA
|
|---|
| Protein sequence | MSQRPARFGT PHASGHRTNQ VLTLPNLISF VRLLGVPVFL YLLLVARADV AAIVVLAVGG
TTDWVDGWAA RRLRQVSRLG ELLDPFVDRL YILATLVAFT LREVVPWQFT VALLAREVLL
LGSLGTLRRY GYGPPPVHYV GKTATFLLLA AFPILLLATA VPATVVSAVG WSLAWWGLTL
YWVAGAMYVV QARRLVRAAR AR
|
|---|
| |