| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2378 |
|---|
| Symbol | |
|---|
| ID | 5058841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2673832 |
|---|
| End bp | 2674743 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474637 |
|---|
| Product | silent information regulator protein Sir2 |
|---|
| Protein accession | YP_001159203 |
|---|
| Protein GI | 145594906 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0217965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGG TGAGTGAACA GATCGAGGTG CTGGCGGGGT TGGTCTCCGG TGGTGGGGTG
GTGGTGCTCA GCGGTGCTGG CCTCTCCACC GAGTCGGGTA TCCCGGACTA CCGGGGGGCC
AGTGGGGCGG CGCGGCGGCA CTCTCCGATG ACGTATCAGG TGTTCGTGGG GGATCCGTTG
GCGCGGCGGC GGTATTGGGC GCGTAGCTAT CTGGGGTGGC GCACGGTGGC CGGGGCGGTG
CCCAATGCCG GGCATCGGGC GGTGGCTCGT TTGCAGGATG CGGGCCTGGT TGACGGGGTT
GTTACGCAAA ACGTGGACGG GTTGCACACC GCGGCGGGCA GTGGCGGGGT GGTGGAGTTG
CATGGGCGCC TGGACGAGGT GGTGTGCCTG GGTTGTGGTG TCGGGATGTC GCGGTGGGAG
CTGCATCAGC GGTTGGCGGA GGCGAACCCG GGGTTTGAGG CGCGGGTGTC GGGGGTGAAT
CCGGATGGTG ACGTCGATCT CGCTGATTGG GCGGTGGCGG GTTTCCGTAC GGTCGATTGC
GCCCGGTGCG ACGCCGGAAC TTTGAAGCCG GACGTGGTGT TCTTCGGTGA GTCGGTGCCG
CCGGCGCGGG TGGCCCGGTG TTTCGCCATG GTGGAGTCCG CGCGGCTGCT GTTGGTGCTT
GGGTCATCTT TGACGGTGTT GTCGGGGCGG CGGTTTGTGG TGCGGGCGGC GAGTTTGGGC
ATTCCGGTGG CGATTGTCAA CCAGGGCGCG ACTCGCGGCG ATGCGTATGC GACGGTGACG
GTGGATGCTC CGCTGGGTCG GGTGTTGCCG GTGCTGGCCG ATCGGTTCGG TGCCGTCCGA
GACGGCGCGG GTCAGCTGGG TGCCGTCCCG GTTGGTGCGG ACGGTGTGGG TGGACCGGTG
GTGGTGGGCT GA
|
|---|
| Protein sequence | MGLVSEQIEV LAGLVSGGGV VVLSGAGLST ESGIPDYRGA SGAARRHSPM TYQVFVGDPL
ARRRYWARSY LGWRTVAGAV PNAGHRAVAR LQDAGLVDGV VTQNVDGLHT AAGSGGVVEL
HGRLDEVVCL GCGVGMSRWE LHQRLAEANP GFEARVSGVN PDGDVDLADW AVAGFRTVDC
ARCDAGTLKP DVVFFGESVP PARVARCFAM VESARLLLVL GSSLTVLSGR RFVVRAASLG
IPVAIVNQGA TRGDAYATVT VDAPLGRVLP VLADRFGAVR DGAGQLGAVP VGADGVGGPV
VVG
|
|---|
| |