Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2361 |
Symbol | |
ID | 5058824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2657065 |
End bp | 2658849 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474621 |
Product | major facilitator transporter |
Protein accession | YP_001159187 |
Protein GI | 145594890 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.213022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTG GATCGGCCGG CTGGTCGAGC TCCTCACCCA AGTCGGTCAC GAGTCTCTCG ATGCGCTCGG CGGTGCAGCG GTGGCGTTCG ACATCTCGCT GCCAGCGGCG TCGACGGCGA GGTTGTGTTC GAGTCGTCGC GACGAACTTC GCGCAGCTCA GGTACGGGTC CCTGCCCGGG AGACGTGTGA CCGCCCCTGG GCTGGGGACG TGTGACCTGG TTAACCAGGC ACCGTATCTA TACGCCGAGT ACAGTTACGG TATGCAAATT GCGGAAACGG ACCGGAAGGC GCCGACGAGG GCGCAGCGGT GGGGGTTGCT GGTCACGGTC AGCGCGGGAC TATTGTTGAT CACGTTGGAC CATTCTGTCC TGTACACCGC CCTGCCGACG CTGACGGCCG GTCTCGGGGC CACCGGCACG CAAAGTTTGT GGATCATCAA CGCCTACCCG GTGGTGATGG CGGGGCTGCT GCTGGGCAGC GGCACGCTGG GCGACCGGGT CGGGCACCGA CGGATGTTCC TGGTCGGGCT GTTCGTGTTC GCCGTCGCCT CCCTGCTGGC GGCGTTCGCG CCCAACACCG GGGTGTTGAT CGCCGCACGG GCGTTACTCG CGGTGGGCGC GGCGACGATG ATGCCCGCCA CCCTGGCCCT GATCCGGGTG ACGTTCCAGG TGGAGCGGGA ACGCAACGTC GCGATCGCGG TGTGGGGTTC CCTGGCCGTG GTGGGTGCCG CGCTCGGCCC GATCGTGGGC GGGGCGCTGT TGGAGACGTT CTGGTGGGGT TCGGTGTTCC TGGTCAACGT TCCGGTCGCC GCCGCCGCCA TGGCCGCGAC GCTGCTCGTC GCGCCGCGCA ACGACCCGGA CCCGAGCAAG CGATGGGACC TGGTGTCCTC GTTGCAGGTG ATGGTCGGCC TGGTCGGCGC GGTGTTTGCG ATCAAGGAAC TCGCACACCA ACCGCCGTCG CCGACCGTGC TGACGATCGC GGTGCTCGCC TCGGCCGTCG GGCTTACCCT CTTCGTCCGC CGGCAGCGGC GCCTGGCCGA CCCACTGCTG GACTTCGCGA TCTTCCGTAA CCCGGCCTTC ACCTCGGGGG TGCTGGCCGC CGCGCTCGCC CTGTTCGCCA TCACCGGGCT CCAACTGGTC ACCACCCAGC GGTTCCAGCT CGTCGCGGGT TTCACCCCCC TGCAAGCGGG CCTGCTGGTC GCGGCGGTCG CGGCCGGCGC GTTGCCGACC GCGCTGCTGG GCGGCGCGGT CCTGCACCGC ACCGGGCTGC TGCCACTGAT CACCGGCGGC CTCACCCTCG CCGTCCCCGG CGTCATCCTC GTCGCCCTCG GCCTGCACGC TGGCCTCCCC GTCCTGGTCA CCGGAATGAT CGTCACCGGC GCCGGACTCG GCGCGACGAT GTCCGTCGCC TCCACCGCGA TCGTCGGCAA CGCCCCCGTC CGCCGCGCCG GCATGGCGGC GTCCGTCGGG GAAACCTCCT ACGAGTTCGG GGCGCTGACC GCCGTCGCGT TGCTCGGCAG CCTCGTCACC GTCGTCTACA CCACCGTGGT CCGCCTCCCG CCCGGCGCGC CCACCGTGGC CGGCGACAGC CTGCCCGACG CCCTCGCCGC AGCCGGCGGC GACCAGGCCG TCATCACCGC CGCGCACACC GCCTACGACA TCGGCTACCT GATCACTATC GCTGTCGTGG CCGTCGCCCT CACCGCCGGC GCGGCACTCA CCGGACGACT CCTGCGTCAC CACGGCCCCG GCACTGCATC CGGCGTCATT CCCGCCGAGC ACTAA
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Protein sequence | MALGSAGWSS SSPKSVTSLS MRSAVQRWRS TSRCQRRRRR GCVRVVATNF AQLRYGSLPG RRVTAPGLGT CDLVNQAPYL YAEYSYGMQI AETDRKAPTR AQRWGLLVTV SAGLLLITLD HSVLYTALPT LTAGLGATGT QSLWIINAYP VVMAGLLLGS GTLGDRVGHR RMFLVGLFVF AVASLLAAFA PNTGVLIAAR ALLAVGAATM MPATLALIRV TFQVERERNV AIAVWGSLAV VGAALGPIVG GALLETFWWG SVFLVNVPVA AAAMAATLLV APRNDPDPSK RWDLVSSLQV MVGLVGAVFA IKELAHQPPS PTVLTIAVLA SAVGLTLFVR RQRRLADPLL DFAIFRNPAF TSGVLAAALA LFAITGLQLV TTQRFQLVAG FTPLQAGLLV AAVAAGALPT ALLGGAVLHR TGLLPLITGG LTLAVPGVIL VALGLHAGLP VLVTGMIVTG AGLGATMSVA STAIVGNAPV RRAGMAASVG ETSYEFGALT AVALLGSLVT VVYTTVVRLP PGAPTVAGDS LPDALAAAGG DQAVITAAHT AYDIGYLITI AVVAVALTAG AALTGRLLRH HGPGTASGVI PAEH
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