Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2358 |
Symbol | |
ID | 5058821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2652734 |
End bp | 2654167 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474618 |
Product | hypothetical protein |
Protein accession | YP_001159184 |
Protein GI | 145594887 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.640506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.200266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCAGA GCAGGAGACT CCCCCGCCCG TCCGGGGTGC GCGGTCGACG CCGCGCACCC CGCGCCGTCG CGGCGGTCAG CGCCGTGGCC CTCACCGGAG TCGCTGGCCT GGCCGGCGCT GGATCGGCCA CCGCGTACCA GCCCTCGCCC GACCGCGAGG TCACTGGTGG CCAGCCGCAC CGTGAGTGGT CGAAGGTCGA CGGCGAGTGG GGTGGTGACT GGGGAAAGGC CGGTCACTCG GGCTGGAAGG GTGATGGCCA TGGTGACGGG AAGGACAAGG GCACCCCGGT GCCCTGCGAC CCCAACGCGC TGATCGCCGC CATCACCGCG GCGAACCAGG CCGGCGGCGG CACCCTGCGC CTCGCCGAGA AGTGCGTCTA CACCCTGACG GTCAACCAGG ACGACAACGG ACTACCCCCG GTCTTCCAGC CGATCACGAT CTACGGCCAG GGCGCCACCA TCATCCGGGC CGCCGCCGCC GACAACTTCC GCATCTTCGA GGTCATCACC GGCGGCGACC TCACCCTCAA AGACCTCACC GTCGCCGGCG GAAGGCTCGA GGGCAACAAC GACGACGGCG GCGGCATCCG CGCTGGCGAA GGCACCCGAC TGACCCTCGA ACGCGTCACC GTCCGGGACA ACATGACCCT GGGCGGCAAC GGCGACGGCG GCGGCGTCTG GGGTGACCGG AGCAAAGTCA CGATCACCAA GAGCACCATC ACCCGCAACA CCGCCGGCGA TGAGGGCGGC GGCGTCTCCA GCGACCACGG CACCTTCGCG ATCAGCAAGT CGAAGCTGAC CAACAACACC GCCGGCACCA CCGGCGGTGG GTTCTCCAAC GACGAGGGCT CCGCCACTAT CAGCCACACC CTGATCAGCG ACAACACCGC TACCGACGGT GGGGGCGTCG ACAACGACGG CGACCTCTCC GAGATCGTCC ACAGCACCAT CACCCGCAAC ACCGCCAGCG GACTCGGCGG CGGCATCTAC GACAACGGCG AGGAAGCCCT TCTACTCCAG CACGTCAAGG TCGCCGAGAA CACCGCCACC TCCGGTGGGG GGCTCTACCT CACCACCGAT CTCGGTGTCA CCGTTGAGGA CAGCAAGATC GTGTACAACA CCGCCACCAC CGGCGACGGC GGCGGCATCG CCATCATCGG CGACGGCGGC GACCCCGTGG TGGCCCTGCG CCGTACCACC GTCTCCGGCA ACCAAGCAGG CGGAGCGGCC GGCGGCATCT TCTTCAACCC CTCCGACCCC ACCACCGTCC TCACCCTCAC CGACGTCCGG GTCACCGACA ACCTCGCCCA AAACGAACCC GGCGGCGTCT ACAACAACGG CGTGATCGAC GTCTTCGGCA AGGTCATCAT CATCAACAAC CGACCCACCA ACTGCACCGG CAGCCCCAAC CCCGTACCCA CCTGCTTCGG CTGA
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Protein sequence | MLQSRRLPRP SGVRGRRRAP RAVAAVSAVA LTGVAGLAGA GSATAYQPSP DREVTGGQPH REWSKVDGEW GGDWGKAGHS GWKGDGHGDG KDKGTPVPCD PNALIAAITA ANQAGGGTLR LAEKCVYTLT VNQDDNGLPP VFQPITIYGQ GATIIRAAAA DNFRIFEVIT GGDLTLKDLT VAGGRLEGNN DDGGGIRAGE GTRLTLERVT VRDNMTLGGN GDGGGVWGDR SKVTITKSTI TRNTAGDEGG GVSSDHGTFA ISKSKLTNNT AGTTGGGFSN DEGSATISHT LISDNTATDG GGVDNDGDLS EIVHSTITRN TASGLGGGIY DNGEEALLLQ HVKVAENTAT SGGGLYLTTD LGVTVEDSKI VYNTATTGDG GGIAIIGDGG DPVVALRRTT VSGNQAGGAA GGIFFNPSDP TTVLTLTDVR VTDNLAQNEP GGVYNNGVID VFGKVIIINN RPTNCTGSPN PVPTCFG
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