Gene Strop_2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2356 
Symbol 
ID5058819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2651186 
End bp2651965 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content72% 
IMG OID640474616 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001159182 
Protein GI145594885 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.400478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0671284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTGG CCACCTTCAA CCTGCTGCAC GGCCGGTCCC GCACCGACGG GCTGGTCGAT 
TCGCGACGGC TCACCGCCGC GGTCGCCGCC CTCGATGCCG ATGTTCTCGC CCTCCAAGAG
GTCGATCGGG GTCAGGGCCG CAGCGGCAAC CTGGACCAGA CCGCCCTCGC CGCCCACGCC
CTCGCCGCCT GCGAACACCG CTTCGCCGCC GCCGTCGTCG GTGAACCCGG CAGACAGGTC
CGTCCCCTGA CCCACGACGA CGACGGCCAT GACGAACCCC GCTTTGGTGT CGGCCTGGTC
AGCCGCCATC CGGTCATCTC CTGGCAGATC ATCCGGTTGA CGCCGGCCCC GGTCCGCGCA
CCGGTCTACG TACCCGGATC GCGCGGTGGC CTCGTGCTGC TCCAGGACGA ACCCCGCGTC
GTACTCGCGG CGGTCCTGCG CACCCCGCAC GGTCTCGTGA CAGCCGCCGC CACCCACCTG
TCGTTCGTCC CCGGTTGGAA CGCCCACCAG CTGCGCCAGA CCGTCCGCGC GCTGCGGGCC
CTGCCCGCAC CACGGATCCT GCTCGGCGAC CTCAACCTGC CCGCCGGGTG CGCCCGACTC
CTGACCGGAT GGCATCCTCT CGGCCGCCGA CCCACGTATC CGGCTGGACG ACCCCGCATC
CAACTCGACC ACGTCCTCGC TGACCGGCAG GACCGCCATC GACTCCCGCC GGTGACGGCC
GTGCGAACCC CGCTGTCGGT GATCTCCGAT CACCGGCCCC TCGTGGTTGA CCTCGGTTAA
 
Protein sequence
MRLATFNLLH GRSRTDGLVD SRRLTAAVAA LDADVLALQE VDRGQGRSGN LDQTALAAHA 
LAACEHRFAA AVVGEPGRQV RPLTHDDDGH DEPRFGVGLV SRHPVISWQI IRLTPAPVRA
PVYVPGSRGG LVLLQDEPRV VLAAVLRTPH GLVTAAATHL SFVPGWNAHQ LRQTVRALRA
LPAPRILLGD LNLPAGCARL LTGWHPLGRR PTYPAGRPRI QLDHVLADRQ DRHRLPPVTA
VRTPLSVISD HRPLVVDLG