Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2350 |
Symbol | |
ID | 5058813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2646152 |
End bp | 2647414 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640474610 |
Product | major facilitator transporter |
Protein accession | YP_001159176 |
Protein GI | 145594879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.497178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0402385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAACTA CTGACTCCCC GTCGGCGTCT CATGCCCCGG CGGACTACAC CGATCGACCG CCGTCGCCAA GCTGGTCGCC GTGGCGGACG GTGATCGGAT TCGGTGTGGT GAGCCTGGCC GCCGACATGG TGTACGAGGG CGCCCGGTCG GTGTACGGGC CGCTCCTCGC ATCGCTGGGA GCGTCCGCAC TGATCGTCGG CTTGATCACC GGTGCTGGTG AGGCGGCCGC GCTGGCGCTG CGGCTGGTGT CGGGGCCGCT GGCCGACCGG ACCCGCCGTT ACTGGACGTT GACGACCCTC GGGTACGCGC TGACGGCGGT GTGCGTGCCG CTGCTGGCGG TGACCCCGCG GTTGGGTGCC GCGGGGCTGG TGGTGGCCGC CGTGTTGATC GTGGCTGAGC GGCTGGGTAA GGCCGTGCGG TCACCGGCGA AGTCGGTGCT GCTGGCGGAC GCTGCCGGCG CGGTGGGAAT GGGCCGCGGA ATGGGCGTCC ACAAGGCCCT GGACCAGGTC GGGGCGTTCG CCGGCCCGTT GCTGCTGGCC GCACTCACCG CCGCCGCCGG TGGACTCCTG TGGCCGGGGC TGGCCGGGCT GGCGGTGCCG GGGGCGCTGG CGATGGTCCT GCTCGTGGTC CTGCGCCGTC GCGCCGGCAT CGCGCACCCC CGCGACGTTG CCGCCGACAA CCGGGAGGAG TACGTCGACC CCGCCGGGCG TGCCTCGCTG CCGGCGTCCT TCGGATGGTT CGCGGTGGCC TGTGCCCTGT GCACCGCGGG GCTGATGACC TTCGGTTTGA TCGGGTTTCA CCTGGCCCAG ACCGGTCTGG TGCCGGCCGC GGGGGTGCCG CTGCTGTACG CCGCGGCGAT GGCGGCGGCC GCCGTGGCCG CGCTCGCCAC CGGTGCGGCC TACGACCACA TCGGAGCCCG TGTCCTGCTG GTTCTGCCCA TCCTGGTAGC CGTGGTGCCC CCGTTGGCGT TCACCACCGG CCTGGCGATG GCCGCCGGCG GGGTCCTGGC GTGGGGCGCC GCGCTGGGGG TGCAGGATTC CACCGTCAAG GCGTTCGTGG CCGACCTCGT GCCCCGGTCG CGCCGGGGCA CCGCGTACGG CGTCTTCGCC GCCGTCCAGG CCGCCGGTGC GCTCGTCGGC GGCGTCGCCG CCGGCGCCCT GTACGACTCT TCCCGGGCCG GGCTCTTCGC CGCGGTCGCC GCCGCGCAGG CCACCGCGAT GCTCATCCTG GTCCGCGTGT TGGCCCGTAC CCGGCGCCGG TGA
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Protein sequence | MQTTDSPSAS HAPADYTDRP PSPSWSPWRT VIGFGVVSLA ADMVYEGARS VYGPLLASLG ASALIVGLIT GAGEAAALAL RLVSGPLADR TRRYWTLTTL GYALTAVCVP LLAVTPRLGA AGLVVAAVLI VAERLGKAVR SPAKSVLLAD AAGAVGMGRG MGVHKALDQV GAFAGPLLLA ALTAAAGGLL WPGLAGLAVP GALAMVLLVV LRRRAGIAHP RDVAADNREE YVDPAGRASL PASFGWFAVA CALCTAGLMT FGLIGFHLAQ TGLVPAAGVP LLYAAAMAAA AVAALATGAA YDHIGARVLL VLPILVAVVP PLAFTTGLAM AAGGVLAWGA ALGVQDSTVK AFVADLVPRS RRGTAYGVFA AVQAAGALVG GVAAGALYDS SRAGLFAAVA AAQATAMLIL VRVLARTRRR
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