Gene Strop_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2350 
Symbol 
ID5058813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2646152 
End bp2647414 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content74% 
IMG OID640474610 
Productmajor facilitator transporter 
Protein accessionYP_001159176 
Protein GI145594879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.497178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0402385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAACTA CTGACTCCCC GTCGGCGTCT CATGCCCCGG CGGACTACAC CGATCGACCG 
CCGTCGCCAA GCTGGTCGCC GTGGCGGACG GTGATCGGAT TCGGTGTGGT GAGCCTGGCC
GCCGACATGG TGTACGAGGG CGCCCGGTCG GTGTACGGGC CGCTCCTCGC ATCGCTGGGA
GCGTCCGCAC TGATCGTCGG CTTGATCACC GGTGCTGGTG AGGCGGCCGC GCTGGCGCTG
CGGCTGGTGT CGGGGCCGCT GGCCGACCGG ACCCGCCGTT ACTGGACGTT GACGACCCTC
GGGTACGCGC TGACGGCGGT GTGCGTGCCG CTGCTGGCGG TGACCCCGCG GTTGGGTGCC
GCGGGGCTGG TGGTGGCCGC CGTGTTGATC GTGGCTGAGC GGCTGGGTAA GGCCGTGCGG
TCACCGGCGA AGTCGGTGCT GCTGGCGGAC GCTGCCGGCG CGGTGGGAAT GGGCCGCGGA
ATGGGCGTCC ACAAGGCCCT GGACCAGGTC GGGGCGTTCG CCGGCCCGTT GCTGCTGGCC
GCACTCACCG CCGCCGCCGG TGGACTCCTG TGGCCGGGGC TGGCCGGGCT GGCGGTGCCG
GGGGCGCTGG CGATGGTCCT GCTCGTGGTC CTGCGCCGTC GCGCCGGCAT CGCGCACCCC
CGCGACGTTG CCGCCGACAA CCGGGAGGAG TACGTCGACC CCGCCGGGCG TGCCTCGCTG
CCGGCGTCCT TCGGATGGTT CGCGGTGGCC TGTGCCCTGT GCACCGCGGG GCTGATGACC
TTCGGTTTGA TCGGGTTTCA CCTGGCCCAG ACCGGTCTGG TGCCGGCCGC GGGGGTGCCG
CTGCTGTACG CCGCGGCGAT GGCGGCGGCC GCCGTGGCCG CGCTCGCCAC CGGTGCGGCC
TACGACCACA TCGGAGCCCG TGTCCTGCTG GTTCTGCCCA TCCTGGTAGC CGTGGTGCCC
CCGTTGGCGT TCACCACCGG CCTGGCGATG GCCGCCGGCG GGGTCCTGGC GTGGGGCGCC
GCGCTGGGGG TGCAGGATTC CACCGTCAAG GCGTTCGTGG CCGACCTCGT GCCCCGGTCG
CGCCGGGGCA CCGCGTACGG CGTCTTCGCC GCCGTCCAGG CCGCCGGTGC GCTCGTCGGC
GGCGTCGCCG CCGGCGCCCT GTACGACTCT TCCCGGGCCG GGCTCTTCGC CGCGGTCGCC
GCCGCGCAGG CCACCGCGAT GCTCATCCTG GTCCGCGTGT TGGCCCGTAC CCGGCGCCGG
TGA
 
Protein sequence
MQTTDSPSAS HAPADYTDRP PSPSWSPWRT VIGFGVVSLA ADMVYEGARS VYGPLLASLG 
ASALIVGLIT GAGEAAALAL RLVSGPLADR TRRYWTLTTL GYALTAVCVP LLAVTPRLGA
AGLVVAAVLI VAERLGKAVR SPAKSVLLAD AAGAVGMGRG MGVHKALDQV GAFAGPLLLA
ALTAAAGGLL WPGLAGLAVP GALAMVLLVV LRRRAGIAHP RDVAADNREE YVDPAGRASL
PASFGWFAVA CALCTAGLMT FGLIGFHLAQ TGLVPAAGVP LLYAAAMAAA AVAALATGAA
YDHIGARVLL VLPILVAVVP PLAFTTGLAM AAGGVLAWGA ALGVQDSTVK AFVADLVPRS
RRGTAYGVFA AVQAAGALVG GVAAGALYDS SRAGLFAAVA AAQATAMLIL VRVLARTRRR