Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2343 |
Symbol | |
ID | 5058806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2637722 |
End bp | 2638429 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474603 |
Product | thymidine kinase |
Protein accession | YP_001159169 |
Protein GI | 145594872 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.01605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACC ACGCCTCCGC CGATTCGACC TGCCTGGCCC CCGCGTCCGG ATCCGACGAA CGGGTCGGCG GTGCGGGCGC GGACGGGCGG CCGTTGCACG CCGCGGCGCT GCGGTTCTAC TGGGGTCCGA TGGACTGTGG CAAGTCGACC ATGGCGCTGC AGATGAACCA CAACCACGCC CGGCAGGGGC GGCGGGGCCT GGTCACCACC CGCATCGACC GGTCGCTGGG CCCGCGGGTG ACCACCCGCA TCGGGTTGGC GCACGAGGCG GTCGAGGTCA CCGATGAGCT GGATCTGCGC GCTCTGGTCC GGGGCCGGCG GGCCGAGGGG GTCCGGGTCG ACTACCTGAT CTGCGACGAG GCCAGCTTCT ACCAGGTGGA GCATGTCGAG CAGCTGGCCG AGCTGGTCGA CGACGACGAT GTCGACGTGT ACGCGTTCGG TCTGGCCACC GACTTCCGGT CCCGTATGTT CCCGGCCGCG CGACGGCTGT TCGAGTTGGC GGACTCGGTG GCCCGGATCC AGGTGGAGGT GCTCTGCTGG TGCGGGCGGG AGGGGCTGCT CAACGCCCGC GTGGTCAACC GGCGGGTGGC CCGGGAGGGC GCGCAGGTGG TCGTCGGTGA CACGGCCGAG ACTGCCCAGG TGCGCTACCA GGTGCTCTGC CGGCGTCATC ACCGTGCCGG TGACCTGGGG CCTGCCGCAT CCGACTGA
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Protein sequence | MTDHASADST CLAPASGSDE RVGGAGADGR PLHAAALRFY WGPMDCGKST MALQMNHNHA RQGRRGLVTT RIDRSLGPRV TTRIGLAHEA VEVTDELDLR ALVRGRRAEG VRVDYLICDE ASFYQVEHVE QLAELVDDDD VDVYAFGLAT DFRSRMFPAA RRLFELADSV ARIQVEVLCW CGREGLLNAR VVNRRVAREG AQVVVGDTAE TAQVRYQVLC RRHHRAGDLG PAASD
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