| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2338 |
|---|
| Symbol | |
|---|
| ID | 5058801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2632065 |
|---|
| End bp | 2633063 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474598 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_001159164 |
|---|
| Protein GI | 145594867 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.106459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00309455 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA CCACCATCTG GTTTCTCCTC GTCGCCGTGC TGTTCACCGG CTACTTCATC
CTCGAGGGCT TCGACTTCGG CGTCGGCATG CTCCTGCCGG TCCTCGGCCG CGACGACCGC
GAACGCCGCG TCCTGATCAA CACCATCGGC CCGGTCTGGG ACGGCAACGA GGTGTGGCTG
ATCACCGCCG GCGGCGCCAT GTTCGCCGCC TTCCCCGAGT GGTACGCCAC CCTCTTCTCC
GGCTTCTACC TACCGCTCCT ACTCATCCTG CTCGCCCTGA TCGCCCGCGG CGTCGCCTTC
GAATACCGCA ACAAGCGCCC CGAGGCATCC TGGAAACGTC GCTGGGACCA CGCCATCTTC
TTCGGATCCC TACTCCCCGC CGTCCTGTGG GGAGTCGCAT TCGCCAACAT CCTGCGCGGC
GTGCCCCTCA CCGCCGACCA CGAATACGCC GGCGGGCTCC TCAACCTCCT CAACCCCTAC
GCGCTCCTCG GCGGCGTCAC CACCGCCGCC CTGTTCCTCA CCCACGGTGC CGTGTTCATC
GCCCTCAAAA CCGTCGGCGA CGTCCGCCAC CGTGCCGCCG CCCTCGCAGT CCGCGTCGGT
GTCGCCACCG CCGTACTCGC CGTCGCGTTC CTCACCTGGA CCCTGACCAT CCGCGCCAAC
ACGGCCGCCG TCGCCCTCGC CGTCGCCGCC GCCGTGGCCC TGCTCGGCGG CCTCGCCGCC
GCCTACGCCC GCCGGGAAGG ATGGGCCTTC ACCGGCACCG CCGCCGCGAT CGGCCTGGCA
GTGGCAACTC TGTTCACCGC CCTGTTCCCG AACGTGCTGC CGTCCACCCT GGACGCCGCC
GGCACCCTCA CCGCCACCAA CGCCGCCTCC ACCCCCTACA CCCTCACCAT CATGACCTGG
GTGGCGGTGA TCTTCACCCC GATCGTGCTG GCCTACCAGG GCTGGACCTA CTGGGTGTTC
CGCAAGCGCA TCGGCGTAGC CCACATCCCG CGACACTGA
|
|---|
| Protein sequence | MDLTTIWFLL VAVLFTGYFI LEGFDFGVGM LLPVLGRDDR ERRVLINTIG PVWDGNEVWL
ITAGGAMFAA FPEWYATLFS GFYLPLLLIL LALIARGVAF EYRNKRPEAS WKRRWDHAIF
FGSLLPAVLW GVAFANILRG VPLTADHEYA GGLLNLLNPY ALLGGVTTAA LFLTHGAVFI
ALKTVGDVRH RAAALAVRVG VATAVLAVAF LTWTLTIRAN TAAVALAVAA AVALLGGLAA
AYARREGWAF TGTAAAIGLA VATLFTALFP NVLPSTLDAA GTLTATNAAS TPYTLTIMTW
VAVIFTPIVL AYQGWTYWVF RKRIGVAHIP RH
|
|---|
| |