Gene Strop_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2327 
Symbol 
ID5058790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2620765 
End bp2621472 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID640474587 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_001159153 
Protein GI145594856 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.902619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00279069 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGGCTCG ATCGGCGACG CAACGAAGAC GCCATTCATG TGGGGCGTCG TCTGTTCGCG 
GTCGTCGATG GTCTCGGCAA CCACGGCGCC GGCGACGTCG CCAGCGCCAC CGCGATCGAG
GCGGTGCGGC GATACGACGA GGTGGTGGAG CCGCACGCAC TGCCGGTCGT GCTGGGACAG
GCAGTGCGTG CGGCGAACAA CGCGCTGCGG CAGCGTATTG CCGCCGATCC TGGCCTTGCG
GGCATGGGCA CCACCCTGGT TGCCCTGCTC AGTGCCGGTG CGGCGGCCGC GCTGGCCAAT
GTCGGTGACT CTCGGGCCTA TCTCCTGCCG GCGCCGGACC TTCGGCGGGG ACGGAGGACG
ATCCAGATCA CGGAGGATCA CCTTTACCGG CATCTGATCG CTGGCGCCGC CGAGGTGCCC
AACCTTTCCG ACCGGCTGAC GCGTTTCCTG GATGGCTGCC CCGACGGCCG ATCAGCCGAC
ATCACCGTGT TGACCCTGAC TCCCGGCGAT CGGATCCTGC TCTGTTCTGA CGGACTCAGC
TCCTACGTGT CGCATGACCA TCTCCACACC ACTCTGGCGG CCTCAGCGAG TCCCCAGCAG
GCGGTGGACC GGTTGGTGAC ATCGGCGTTG GGCCGGGGTG GCCCTGACGT GTCAGTAATC
GTCCTCTTTA TCAGGAACAA CAGGGTGAAT CTGGACTACA GCGGGTAG
 
Protein sequence
MGLDRRRNED AIHVGRRLFA VVDGLGNHGA GDVASATAIE AVRRYDEVVE PHALPVVLGQ 
AVRAANNALR QRIAADPGLA GMGTTLVALL SAGAAAALAN VGDSRAYLLP APDLRRGRRT
IQITEDHLYR HLIAGAAEVP NLSDRLTRFL DGCPDGRSAD ITVLTLTPGD RILLCSDGLS
SYVSHDHLHT TLAASASPQQ AVDRLVTSAL GRGGPDVSVI VLFIRNNRVN LDYSG