Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2327 |
Symbol | |
ID | 5058790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2620765 |
End bp | 2621472 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474587 |
Product | protein phosphatase 2C domain-containing protein |
Protein accession | YP_001159153 |
Protein GI | 145594856 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.902619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00279069 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGGCTCG ATCGGCGACG CAACGAAGAC GCCATTCATG TGGGGCGTCG TCTGTTCGCG GTCGTCGATG GTCTCGGCAA CCACGGCGCC GGCGACGTCG CCAGCGCCAC CGCGATCGAG GCGGTGCGGC GATACGACGA GGTGGTGGAG CCGCACGCAC TGCCGGTCGT GCTGGGACAG GCAGTGCGTG CGGCGAACAA CGCGCTGCGG CAGCGTATTG CCGCCGATCC TGGCCTTGCG GGCATGGGCA CCACCCTGGT TGCCCTGCTC AGTGCCGGTG CGGCGGCCGC GCTGGCCAAT GTCGGTGACT CTCGGGCCTA TCTCCTGCCG GCGCCGGACC TTCGGCGGGG ACGGAGGACG ATCCAGATCA CGGAGGATCA CCTTTACCGG CATCTGATCG CTGGCGCCGC CGAGGTGCCC AACCTTTCCG ACCGGCTGAC GCGTTTCCTG GATGGCTGCC CCGACGGCCG ATCAGCCGAC ATCACCGTGT TGACCCTGAC TCCCGGCGAT CGGATCCTGC TCTGTTCTGA CGGACTCAGC TCCTACGTGT CGCATGACCA TCTCCACACC ACTCTGGCGG CCTCAGCGAG TCCCCAGCAG GCGGTGGACC GGTTGGTGAC ATCGGCGTTG GGCCGGGGTG GCCCTGACGT GTCAGTAATC GTCCTCTTTA TCAGGAACAA CAGGGTGAAT CTGGACTACA GCGGGTAG
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Protein sequence | MGLDRRRNED AIHVGRRLFA VVDGLGNHGA GDVASATAIE AVRRYDEVVE PHALPVVLGQ AVRAANNALR QRIAADPGLA GMGTTLVALL SAGAAAALAN VGDSRAYLLP APDLRRGRRT IQITEDHLYR HLIAGAAEVP NLSDRLTRFL DGCPDGRSAD ITVLTLTPGD RILLCSDGLS SYVSHDHLHT TLAASASPQQ AVDRLVTSAL GRGGPDVSVI VLFIRNNRVN LDYSG
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