| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2313 |
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| Symbol | |
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| ID | 5058776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2609289 |
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| End bp | 2610602 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640474573 |
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| Product | sigma-70 region 2 domain-containing protein |
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| Protein accession | YP_001159139 |
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| Protein GI | 145594842 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.326435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGATG GCGAGCTGCC GGCCCCCGAC GTTCTGGAGC GGGTGTTCCG GGAGGAGCGC
GGGCGGCTGC TCGCCACCCT GGTCCGACAC TTCGGCGACC TCGACCTCGC CGAGGAGGTC
GCCTCTGACG CGATCGAGGC GGCCCTGCTG CACTGGCCGG TGCGGGGTGT GCCGAGCCGT
CCGGCGGCCT GGCTGCTCAC CACCGCCCGG CGGCGGGCTG TTGACCGGCT CCGCCGGGAC
CGCGCCTACG CGGCCCGGCT GGCCGTACTC CAGGCCGAGG CCGTCCGGCA AGAGCCGGCC
GCGCCCCAGC CGGGCGACGG CGACGACCTG CCGGACGAGC GGCTGGCGCT CTTCTTCACC
TGCTGTCATC CGGCGCTGCC CGGCGAGACG CAGATCATGT TGACCCTGCG CTACCTGGCC
GGACTCACCA CTGCCGAGGT CGCCCGGGCG TTCCTGGTCC CGGTGCCGAC GATGGCCCAG
CGGATCGGCC GGGCGAAGCA GAAGATCCGG GCCGCCCGGA TCCCGTTCCG GGTTCCGGAC
GCCACCGAAC TGCCGGCCCG GCTCCCCAGG GTGCTCCGGG TGATCTATCT GATCTTCACC
GAGGGGTACG CGGCGAGCAG CGGTCCGCAG CTTGTCCGGA CCGACCTGGC GGACGAGGCG
ATCCGGCTGG CCCGGCTCCT GCACCGGCTG CTGCCCCGAC AACCGGAGGT GACCGGGCTG
CTCGCCCTGC TGCTGCTGGT CGACGCCCGC CGGGCCGCCC GGTGCACCGC CGAGGGCGAC
CTGGTACTCC TCGACGAGCA GGACCGCACA CTCTGGGACC GCGACCAGAT CGAGGAGGGT
CGTCGACTCG TACCCGACGC GCTGGCCAAC GGCCCCGGCC CGTACGCGGT ACAGGCCGCG
ATCGCCGCGC TGCACAGCGA GGCCGCCGAC GTGGCCGGTA CGGACTGGCC CCAGGTGGTC
GCGCTCTACG ACGTACTGGC CCGGCTGGCG CCGTCACCGC TGGTGGAACT GAACCGGGCG
GTGGCGGTGG CGCTGCGGGA CGGTCCGGCC GCCGGGTTGC GGCTGCTCGA CACGCTCGAC
GAGCAGGGCC GGCTGGCCGG ATACCACCTG CTGCCGGCAA CCCGGGCGGA CCTGCTGCGT
CGACTGGGTC GGGTCGAGGA GGCCGCGGCG GCGTACCGTC GGGCACTCGA CCTGGTCGGC
AACGAGCCGG AACGGGCGTT CCTGCGGCGG CGGCTCGCGG AGGCCGTCGC CGCAGCCGGT
AGGCCCCAGT CGTCGTCGAC CGACCGGGAG AACCCGGACG ATCCGGAACT GTGA
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| Protein sequence | MSDGELPAPD VLERVFREER GRLLATLVRH FGDLDLAEEV ASDAIEAALL HWPVRGVPSR
PAAWLLTTAR RRAVDRLRRD RAYAARLAVL QAEAVRQEPA APQPGDGDDL PDERLALFFT
CCHPALPGET QIMLTLRYLA GLTTAEVARA FLVPVPTMAQ RIGRAKQKIR AARIPFRVPD
ATELPARLPR VLRVIYLIFT EGYAASSGPQ LVRTDLADEA IRLARLLHRL LPRQPEVTGL
LALLLLVDAR RAARCTAEGD LVLLDEQDRT LWDRDQIEEG RRLVPDALAN GPGPYAVQAA
IAALHSEAAD VAGTDWPQVV ALYDVLARLA PSPLVELNRA VAVALRDGPA AGLRLLDTLD
EQGRLAGYHL LPATRADLLR RLGRVEEAAA AYRRALDLVG NEPERAFLRR RLAEAVAAAG
RPQSSSTDRE NPDDPEL
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