| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2303 |
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| Symbol | |
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| ID | 5058766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2599215 |
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| End bp | 2600522 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474565 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159131 |
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| Protein GI | 145594834 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.533597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.893433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTAAAC CCCTGGTCCG GGCAGATCCG GCACCCCCGC GCCGGCCGCG CTTCCCGCGG
CTGCTCCAAC AGACGGACTT CCGCCGCTAC TGGTCCGCCC AGACCGTCTC GCTCTTCGGC
GACCAGATCA CCATGCTCGC CATGCCGCTG CTGGCCGTGC TCGCGCTCGG CGCCGGACCC
GCCGAGATGG GCTACCTGAC CGCCGCCTCG CTGCTGCCGA ACCTGCTCTT CTCACTGCCA
GCCGGCGCGT GGATGGACCG CTACCCGCGC CGACGTCAAG TAATGATCAT CGCCGACCTT
GGCCGGGCGG GCCTTCTGCT GGCCGTGCCG CTGCTGTGGT GGGCGGACGC ACTCAACCTG
CCGCTGCTCT GTGTCGTGGC CTTCCTGATC GGGGTCCTCT CGGTGTTCTT CGGGGTGGCC
CACAGCAGCC TGTTCGCCAG CCTGGTCCAG CGGCAGAACT ATGTGGACGC CAACAGTCTG
ATCAGCGGCA GCAGAGCCAT GTCCGACGTG GCCGGCCCGA GCATCGGCGG CGTACTCGTG
CAGGTGCTCA CCGCTCCGGT CGCGCTGGTC GCCGACGTGC TCACCTACCT GACGTCGGCT
GTCTTCCTGA CCCGGACAAC GGTCACCGAG CATCCCGCAC AGACCGGCCC CGGCATGGGC
ATGGCCACCG GCGTGCGCTA CGTGGCCCGC TCCGCGGTGC TACGCGCGGT CCTGCTCGGC
CTCACCACAC TCAACCTGTT CAATTTCATG TTCGCCGCGC TCTTCGTGCT GTACGTGACC
ACCGAGCTGG GCGTCTCCCC CGGGGTACTG GGCCTGGTCA TCGGGGCCGG CGCGTTCGGC
GGACTGCTCG GCGCGGCGGT CACCGGCCCG CTCAGTCGCC GGATTGGCAT CGGCCCGGCG
GTGATTCTCG GCCTCGTCGT CTTCCCGGCC CCACTGATCC TCGTGCCGCT GGCCGGGGGA
CCGCGGCCGC TGGTGCTCGC GCTGCTGCTC ACTGCCGAGT TCGTCTCCGC CCTGGGCGTC
ATGATCCTCG ACATCGCCGC CGGATCGGTG CAGATCGCGG CCACACCGAA GACGATGCTC
GCCGTGGTCT CCGGCGTCCG GCGCACCGTC AACTACGGCA TCCGGCCCGT CGGCGCGCTG
ATCGGCGGCG CGCTCGGCGC CACGATCGGG GTCCGTCCCG CCCTCTGGAT CGCCAGCCTT
GGTGCCCTGC TCGGAGCGTT CTGGGTCGTC TTCTCCCCGC TGCGCACCAT GCGTACCCTG
CCCGAGGAAT GGCATCCGCC CGCGGCGGGC CCGGTGGGCA GCAACTAG
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| Protein sequence | MTKPLVRADP APPRRPRFPR LLQQTDFRRY WSAQTVSLFG DQITMLAMPL LAVLALGAGP
AEMGYLTAAS LLPNLLFSLP AGAWMDRYPR RRQVMIIADL GRAGLLLAVP LLWWADALNL
PLLCVVAFLI GVLSVFFGVA HSSLFASLVQ RQNYVDANSL ISGSRAMSDV AGPSIGGVLV
QVLTAPVALV ADVLTYLTSA VFLTRTTVTE HPAQTGPGMG MATGVRYVAR SAVLRAVLLG
LTTLNLFNFM FAALFVLYVT TELGVSPGVL GLVIGAGAFG GLLGAAVTGP LSRRIGIGPA
VILGLVVFPA PLILVPLAGG PRPLVLALLL TAEFVSALGV MILDIAAGSV QIAATPKTML
AVVSGVRRTV NYGIRPVGAL IGGALGATIG VRPALWIASL GALLGAFWVV FSPLRTMRTL
PEEWHPPAAG PVGSN
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