| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2270 |
|---|
| Symbol | |
|---|
| ID | 5058733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2565984 |
|---|
| End bp | 2566772 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640474532 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001159098 |
|---|
| Protein GI | 145594801 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0541256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0615323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGACG AGACCGGTCA TCCCGGGGTG GGGCGAGTAC TCGTGGTCAT CCCGACCTAC
AACGAGGCCG ACAACCTGAC CTGGATTGTG CAACGGGTGC GTCGGGCTGT GCCGTCGGTG
GACATTCTGG TTGCCGATGA CAACAGTCCG GATGGCACCG GTGCGGTCGC TGAGGCCCTC
GCCGGGCAGG ATCGGCGGGT ACATGTGCTG CACCGGGAGG GCAAGCAGGG ACTCGGCGCC
GCCTACCTTG CCGGGTTCGG CTGGGCGCGG CAGCGCGGCT ACGACGCGGT GGTGGAGATG
GACGCCGACG GCTCACACGC CCCGGAGGAT CTGCCGGCGA TGCTGGCCGC TGCCCGCGAC
GCGGACGTGG TGATCGGGTC CCGGTGGACC CGGGGGGCGC AGGTGCTCAA CTGGCCGCTG
CGGCGGTTGC TGTTGTCGCG CTGCGGCAAC CTGTACGCGC GGCTGGCCCT GGGGATGCCG
GTCTCCGACG CCACCGGCGG CTACCGCGTG TATCGGCTCA GCGCCCTGGA TGCGTTGGAC
CTGGCGTCGG TGTGCTCGCA GGGGTACTCG TTCCAGGTGG AGTTGTCCCG GCTGGCGCAC
CGGGCCGGTG TGCGGATCGT GGAGGTGCCG ATCACGTTCG CCGAGCGGGA ACGGGGCAGC
AGCAAGATGA GCCCGTTCAT CGTCGCCGAG GCGTTGTGGC GGATCACCGG GTGGGCGGTG
GCGGACCGGC GGTTGGCCTT CCGTCGGGGG CTGCACGGCA CGCCTACGGG GCAGGTCCGT
TGGCCGTAG
|
|---|
| Protein sequence | MRDETGHPGV GRVLVVIPTY NEADNLTWIV QRVRRAVPSV DILVADDNSP DGTGAVAEAL
AGQDRRVHVL HREGKQGLGA AYLAGFGWAR QRGYDAVVEM DADGSHAPED LPAMLAAARD
ADVVIGSRWT RGAQVLNWPL RRLLLSRCGN LYARLALGMP VSDATGGYRV YRLSALDALD
LASVCSQGYS FQVELSRLAH RAGVRIVEVP ITFAERERGS SKMSPFIVAE ALWRITGWAV
ADRRLAFRRG LHGTPTGQVR WP
|
|---|
| |