Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2259 |
Symbol | |
ID | 5058722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2554072 |
End bp | 2554569 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474521 |
Product | AsnC/Lrp family regulatory protein |
Protein accession | YP_001159087 |
Protein GI | 145594790 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.25142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0557918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGGAGA TCGACCGGGC CATCGTCGCG GAACTGGCCG TGGACGGCCG GCTGTCATAT ACCGACCTCG CGGAGCGGGT GGGGCTGTCG GTCTCCGCGG TGCACCAGCG GGTCCGCCGG CTGGAGCAGC GCGGGGTCAT CGGCGGGTAT GCGGCACGGG TGTCCTTCGA GGCGCTGGAT CTGCCGCTGA CGGCATTTGT GGCGATTCGA CCGTTTGATC CCTCGCAACC GGATGACGCG CCGGAGCGGC TGGCCCACCT GCCGGAGATC GACTCGTGTT ACTCGGTCGC GGGCGAGGAC TTTTACCTGC TGTTGCTGCG GGTGGCCGGG CCGACAGACC TGGAGCGGGT GCTCCAGGAG ATCCGGATGG CGGCGAGTGT GACCACGCGG ACGACGGTGG TGTTGTCGAC GCCGTACGAG AGCCGCCCGC CGCGGATCAG TGCCGAGGTG TCTGGGCGGT TGCGGCCGAG GGGACCGGCT GGTTCCACCG AAGGATGA
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Protein sequence | MEEIDRAIVA ELAVDGRLSY TDLAERVGLS VSAVHQRVRR LEQRGVIGGY AARVSFEALD LPLTAFVAIR PFDPSQPDDA PERLAHLPEI DSCYSVAGED FYLLLLRVAG PTDLERVLQE IRMAASVTTR TTVVLSTPYE SRPPRISAEV SGRLRPRGPA GSTEG
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