Gene Strop_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2259 
Symbol 
ID5058722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2554072 
End bp2554569 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID640474521 
ProductAsnC/Lrp family regulatory protein 
Protein accessionYP_001159087 
Protein GI145594790 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.25142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0557918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGAGA TCGACCGGGC CATCGTCGCG GAACTGGCCG TGGACGGCCG GCTGTCATAT 
ACCGACCTCG CGGAGCGGGT GGGGCTGTCG GTCTCCGCGG TGCACCAGCG GGTCCGCCGG
CTGGAGCAGC GCGGGGTCAT CGGCGGGTAT GCGGCACGGG TGTCCTTCGA GGCGCTGGAT
CTGCCGCTGA CGGCATTTGT GGCGATTCGA CCGTTTGATC CCTCGCAACC GGATGACGCG
CCGGAGCGGC TGGCCCACCT GCCGGAGATC GACTCGTGTT ACTCGGTCGC GGGCGAGGAC
TTTTACCTGC TGTTGCTGCG GGTGGCCGGG CCGACAGACC TGGAGCGGGT GCTCCAGGAG
ATCCGGATGG CGGCGAGTGT GACCACGCGG ACGACGGTGG TGTTGTCGAC GCCGTACGAG
AGCCGCCCGC CGCGGATCAG TGCCGAGGTG TCTGGGCGGT TGCGGCCGAG GGGACCGGCT
GGTTCCACCG AAGGATGA
 
Protein sequence
MEEIDRAIVA ELAVDGRLSY TDLAERVGLS VSAVHQRVRR LEQRGVIGGY AARVSFEALD 
LPLTAFVAIR PFDPSQPDDA PERLAHLPEI DSCYSVAGED FYLLLLRVAG PTDLERVLQE
IRMAASVTTR TTVVLSTPYE SRPPRISAEV SGRLRPRGPA GSTEG