| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2256 |
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| Symbol | |
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| ID | 5058719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2548878 |
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| End bp | 2551685 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474518 |
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| Product | DSH domain-containing protein |
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| Protein accession | YP_001159084 |
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| Protein GI | 145594787 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.765389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGTA CCGGCGCGGC ACGCACTAAT CTTGGTCCCA TGTCGAGCCC TGCCGAGCGG
TACGCCGCGG CACGCCGCCG GGCCGCGCAG GCCCCCCTGT CCCCGGCGTT GGACGAGTTC
GCCCTCGACC TCGGTGTCGA CCTCGACGAT TTCCAGCGGG AGGCGTGTCA GGCGTTGGAG
CGCGGCAGCG GGGTCCTGGT CTGCGCCCCC ACCGGCGCCG GCAAGACGGT CGTCGGTGAG
TTCGCCGTCC ACCTGGCACT GCGGGGTGGA ACCTCGGCCG ACACGGGCCG CCGCAAGTGT
TTCTACACCA CCCCGATCAA GGCGTTGTCA AATCAGAAGT ACCACGATCT CGTCGACCGG
CACGGCGCCG ACCAGGTCGG GCTGCTCACC GGCGACAACG CGATCAACGG CGATGCGCCC
GTGGTGGTGA TGACCACCGA GGTACTGCGC AACATGCTCT ACGCCGGTTC GGCGACCCTG
GAGGGGCTGG CGTACGTGGT GATGGACGAG GTGCACTACC TCGCCGACCG GTTCCGCGGT
GGCGTGTGGG AGGAGGTGAT CATCCACCTG CCCGCCTCGG TCACGCTGGT GTCGCTGTCG
GCGACGGTGT CCAACGCGGA GGAGTTCGCC GACTGGCTGG TCACCGTGCG GGGCGAGACC
GAGGTCGTGG TCAGCGAGCA CCGGCCGGTG CCGTTGTGGC AACACATGCT CGTTGGCCGG
CGGATGTTCG ACCTGTTCCA CGACGCCGAT GCCGCGCGCA AACACGATGT GCATCCGGAG
TTGCTGCGCT ACACCCGGGA CACGCTGCGC CGCCTCGAGT CGGGGGAGGG ACGCGGTGCC
GGCCCGGGTG GTCGGCGTGG GCCGCGCTGG CGGGGGCCGA TGCGTCCGGA CATCGTTGAT
CGGCTCGACC GGGAGGGGTT GCTGCCGGCG ATCCTGTTTA TCTTCAGCCG TGCCGGCTGC
GACGCGGCGG TACAGCAGTG TCTCGCCGCC GGACTGCGGC TCACCGGCCC GGAAGAGCGG
GCCGAGATCC GCCGGGTGGT GGAGAGCCGG ATCACCACGA TCCCCGGCGA AGACCTGTCG
GTGCTCGGCT ACTGGGACTG GCTGGACGGG CTGGAGCGGG GCCTCGCCGC GCACCACGCC
GGCATGCTGC CGGCGTTCAA GGAGGTCGTC GAGGAGCTGT TTGTCCGCGG GCTGGTGAAG
GCGGTGTTCG CCACCGAGAC CCTTGCGCTG GGCATCAACA TGCCGGCCCG CTGCGTGGTG
TTGGAACGCC TGGTCAAGTA CAACGGCGAG GCCCACGTGG ACCTGACGCC CGGCGAGTAC
ACGCAGCTCA CCGGCCGAGC CGGCCGCCGC GGTATCGACG TGGAGGGGCA CGCCGTGGTG
GTCTGGTCGC CGGAGACCGA CCCGCGGCAC GTGGCCGGTC TCGCATCCAC CCGTACGTAC
CCGCTGCGGT CGAGTTTCCG GCCGTCGTAC AACATGGCCG TCAACCTGGT GGGCAGCGTG
GGCGCGGAGC CAGCCCGGGC GTTGCTGGAG TCCTCCTTCG CGCAGTTCCA GGCGGACCGG
TCGGTGGTGG GGCTGGCGCG GCAGGTCCAG CGCAATACCG AGACGGTTCA GGCGTACGGC
GCGGAGGCGG CCTGCCAGCA CGGTGACTTC GACGCCTACT TCGCGATCCG GGTGGCGATC
GCCGACCGGG AGCGGGAGCT GGCCCGGCAG GGGCAGAGCC AGCGGAAGGC GGCGGCGGTC
GTCTCGCTGG AGCGGCTGCG GGTCGGCGAC GTGATTCGGG TGCCGTCCGG CCGGCGGGCT
GGCCTTGCGG TGGTGCTGGA CCCGGCGGCC GCCGGCTTCG GGGAGCCCCG TCCGTTGGTT
CTGACCCAGG ATCGCTGGGC GGGCCGGGTC GGCCCGGGCG ACTTCACCAC TCCGGCGGAG
GTACTCACCC GGATTCGGGT GCCAAAACAC TTCAATCACC GCTCCCCGGC CGCGCGACGG
GACCTGGCCG CCGCGGTCAG CGGAACCGGG TTGAACCGGC ACGGCGGCCG GCGGGGCGGC
CGGTCGCGGC GCGGTGCTGG GGAGGATGAC CGGCTCGTGC AGCTCCGCGC CGAGCTGCGC
CGCCACCCGT GCCACGCCTG CCCGGAGCGG GAGGAGCACG CCCGCTGGGC GGAGCGTCGC
CGCCGGTTGG AGAAGGACAC CCAGGAGCTG CGGCAGCGGG TGACGGGCCG TACCGGCTCC
TTGGCCCGCA CCTTCGACCG GATCGTGGCG TTGTTGACGG CCCGCGGCTA CCTCGCCTCC
GACGGGGGCG TCACCGACGC CGGTCGGATG TTGAGCCGGA TCTGGACGGA GGCGGACCTG
CTGGTCGCTG AGTGCCTGCG TCGTGGCGTG TGGAGTGGGC TCAGTCCGGC CGAGTTGGCG
GCGGCGGTGT CGGTGGTGGT CTTCGAGGCC CGCCGGGACG TTGACGAGCG CGCATCGCTG
CCGCGGGGCG CGGTGGCGAC GGCGGTCGAC GAGACGTTGA AGCTGTGGGG GGAGATCGAG
GCCGACGAGG CGGCACAGGG GTTGACCGTG ACCCGGGAGC CGGATCTCGG CTTCGCCTGG
CCGGTCTACC GCTGGGCCCG CGGGGAACCA CTCGCGAAGG TCCTCGTCAG CGGCCACATC
GATGGCGAGA TGCCGGCCGG CGACTTCGTC CGCTGGGCTC GGCAGGTGGT GGACCTGCTC
GGTCAGCTGG CCGATTCCGG CGGCGCCTCG GCTGAGCTGC GCAGCACCGC ACGACAGGCC
ATCGTCGCGG TGAACCGTGG GGTGCTCTCC TACCAGGCCA CCGCCTGA
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| Protein sequence | MGRTGAARTN LGPMSSPAER YAAARRRAAQ APLSPALDEF ALDLGVDLDD FQREACQALE
RGSGVLVCAP TGAGKTVVGE FAVHLALRGG TSADTGRRKC FYTTPIKALS NQKYHDLVDR
HGADQVGLLT GDNAINGDAP VVVMTTEVLR NMLYAGSATL EGLAYVVMDE VHYLADRFRG
GVWEEVIIHL PASVTLVSLS ATVSNAEEFA DWLVTVRGET EVVVSEHRPV PLWQHMLVGR
RMFDLFHDAD AARKHDVHPE LLRYTRDTLR RLESGEGRGA GPGGRRGPRW RGPMRPDIVD
RLDREGLLPA ILFIFSRAGC DAAVQQCLAA GLRLTGPEER AEIRRVVESR ITTIPGEDLS
VLGYWDWLDG LERGLAAHHA GMLPAFKEVV EELFVRGLVK AVFATETLAL GINMPARCVV
LERLVKYNGE AHVDLTPGEY TQLTGRAGRR GIDVEGHAVV VWSPETDPRH VAGLASTRTY
PLRSSFRPSY NMAVNLVGSV GAEPARALLE SSFAQFQADR SVVGLARQVQ RNTETVQAYG
AEAACQHGDF DAYFAIRVAI ADRERELARQ GQSQRKAAAV VSLERLRVGD VIRVPSGRRA
GLAVVLDPAA AGFGEPRPLV LTQDRWAGRV GPGDFTTPAE VLTRIRVPKH FNHRSPAARR
DLAAAVSGTG LNRHGGRRGG RSRRGAGEDD RLVQLRAELR RHPCHACPER EEHARWAERR
RRLEKDTQEL RQRVTGRTGS LARTFDRIVA LLTARGYLAS DGGVTDAGRM LSRIWTEADL
LVAECLRRGV WSGLSPAELA AAVSVVVFEA RRDVDERASL PRGAVATAVD ETLKLWGEIE
ADEAAQGLTV TREPDLGFAW PVYRWARGEP LAKVLVSGHI DGEMPAGDFV RWARQVVDLL
GQLADSGGAS AELRSTARQA IVAVNRGVLS YQATA
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