| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2253 |
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| Symbol | |
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| ID | 5058716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2546122 |
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| End bp | 2547072 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474515 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001159081 |
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| Protein GI | 145594784 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0111175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.835766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCTTCG CCCTGCGTAA ACGCGGCCCG AGTAGTTTCC AACGGGCCTC GGAAGGCTCG
ATGACCCTGG TCGAGCACGT CCGCGAGCTG CGAAATCGGC TGTTCAAGGC GTCCCTGGCG
ATCCTGGTCG GCTTCGGTGT CGGCCTTTGG TTCGCCGGCC CGGTGCGCGG CATCCTGCAA
CGGCCATACT GCGAACTGCC GCAGGCAAAG ACCACCGACG GGGCCTGCGA CTTCGTGCAG
CTCGGTCCCG CCGACCTGTT CCTGCTTAAC CTCAAGATCG GCCTGTGGGT GGGGCTGATC
CTCGCCGCGC CGGTGTGGCT GTACCAGCTG TGGGCCTTCA TCGCCCCCGG CCTGCACAAA
CACGAGCGGC GCTACGCGTA CGTCTTCACC GCGCTCGCGG CACCGCTGTT CATCGCCGGC
GCGGTGCTGG CGTACTTCGT GACCTCCAAG GGCCTGGAGT TCCTGCTGGA GGTCTCCGGC
CCCGAGATCA ATACCACCCT CGACATCACC CGCTACGTCT CGTTCGTCAC CAACCTGATC
CTGCTGTTCG GGGTGGCGTT CGAGTTCCCG CTGATCGTGT TGATGCTCAA CTTCGTCGGC
GTTACCAGCG CGAAGCGGTT GCTGGGCTGG TGGCGGGTGG CGGTGTTCGT GTTCTTCGCC
TTCGCTGCGG TGGTCACGCC CACGCCGGAC CCGTTCGGTA TGACCGCGTT GGCGCTGTGC
CTGTGCGCCC TCTACTTCGC GGCCGTCGGT GTCGCATTCC TCAACGACAA ACGTCGGGGC
CGCGGTAAGG AGATCTACGC CGGCCTCGCC GACGACGAGG TGTCGCCGCT GAAGGAGGAG
AACGACCCCG TCGAGGCGAG TGCCCCGGTT GGGGCGCCGG AATCGATCGC GGAGCCAGAG
CCGGTCGTCA GGCCCGCGCC GATCGAGCGC CGGTACGACG ACATGACCTG A
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| Protein sequence | MAFALRKRGP SSFQRASEGS MTLVEHVREL RNRLFKASLA ILVGFGVGLW FAGPVRGILQ
RPYCELPQAK TTDGACDFVQ LGPADLFLLN LKIGLWVGLI LAAPVWLYQL WAFIAPGLHK
HERRYAYVFT ALAAPLFIAG AVLAYFVTSK GLEFLLEVSG PEINTTLDIT RYVSFVTNLI
LLFGVAFEFP LIVLMLNFVG VTSAKRLLGW WRVAVFVFFA FAAVVTPTPD PFGMTALALC
LCALYFAAVG VAFLNDKRRG RGKEIYAGLA DDEVSPLKEE NDPVEASAPV GAPESIAEPE
PVVRPAPIER RYDDMT
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