Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2250 |
Symbol | |
ID | 5058713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2544340 |
End bp | 2545353 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474512 |
Product | hypothetical protein |
Protein accession | YP_001159078 |
Protein GI | 145594781 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0118565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCCGGT CTACCCGGTC CGGGTCCCGT ACCTCCGCGG ATCGGTTGGC CCGGCTGCTC AACCTGGTGC CCTTCCTACT GGCCCGGCCC GGTATCGAGA TCGCCGAGGC AGCGGGTGAC CTGGGGGTGA CCGAGCGGCA GCTGCGGGAG GACCTGGAGC TGCTCTGGGT GTGTGGGCTG CCGGGCTACG GCCCGGGGGA CCTGATCGAC ATGGCCTTCG ACGGTGACCG GGTGACGATC ACCTACGACG CCGGCATCGA TCGACCGCTG CGGCTGACCC CCGACGAGGC CCTCGCGCTG GTTGTGGCGC TGCGAATGCT GGCGGAGACG CCGGGGGTGG CCAACCGGGA AGCAGTGGAG CGGGCTCTGG TCAAGATCGA AAGTGCCGCG GGTGACCGGT TGGGTGCCCC GGTCGCGGTA CGGCTGCCGG CAGACAATCG CCGGGTGGCG GAGCTGCGGG CGGCGGTGGA GAGCGGCCGG GCGCTGCGGA TCACCTACTA CTCGGTGGCC CGGGACGAGA CGATCGAGCG GGTCGTCGAC CCCCTGCGAA TACTCGTCGT CGGCGGCCGG GCGTACATGG AGGCCTGGTG CCGCCGGGCC GAGGGGATGC GGGTGTTCCG GGTCGACCGG ATCGACGCGG TGACCCGGTT GGCCGAGCCG GCGCGGGTGC CGTCGCAGGC GGTGCCGCAC GACCTCACCG GCGGTGTGTT CCGGCCCACG GCGGATCTGC CGCTGGTCAC CCTGCGAATC GGTCGGAGTG AGCGGTGGAT CACCGAGTAC TACCCGTGTG AGCGGGTCGA ACCAGGCGAT GGCGAATGGT TGGTCTCACT CCGGGTCACC GACCTGGGCT GGGCCCGCCG CTTCGTGTTG GGCCTGGGTC CGGAGGTCAC CGTGGTGGCG CCGGCGGAGC TGGCCACACA GGTGCATGCC GCGGCGACCG CTGCCCTCGA GGCGTACGCG ATGCCGCCGC CGAGCGCGGC GGCCGACCCG GCGGCATCGA CGAGCAGCCG GTAG
|
Protein sequence | MTRSTRSGSR TSADRLARLL NLVPFLLARP GIEIAEAAGD LGVTERQLRE DLELLWVCGL PGYGPGDLID MAFDGDRVTI TYDAGIDRPL RLTPDEALAL VVALRMLAET PGVANREAVE RALVKIESAA GDRLGAPVAV RLPADNRRVA ELRAAVESGR ALRITYYSVA RDETIERVVD PLRILVVGGR AYMEAWCRRA EGMRVFRVDR IDAVTRLAEP ARVPSQAVPH DLTGGVFRPT ADLPLVTLRI GRSERWITEY YPCERVEPGD GEWLVSLRVT DLGWARRFVL GLGPEVTVVA PAELATQVHA AATAALEAYA MPPPSAAADP AASTSSR
|
| |