Gene Strop_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2238 
Symbol 
ID5058701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2531666 
End bp2532622 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content72% 
IMG OID640474500 
Producthypothetical protein 
Protein accessionYP_001159066 
Protein GI145594769 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAC CGCCCTCCGA CGCGCCCGAC CAGCACGTCC CCGCACCGCC TCCAGCACGC 
CGCGGGCCCT TCCACCCCGG TGACCGGGTG CAGTTGACCG ACCCGAAGGG GCGCATGCAC
ACCGTCACCC TCGAGCCCGG CAAGGAGTTC CACACCCACC GCGGCATCCT TCACCACGAC
GCCCTGATCG GCCAGCCCGA CGGCAGCGTC GTCAGTACCG CCGGCGGCGG TACGGCCTTC
CTGGCCCTGC GTCCGCTGCT CGCCGACTAC GTCTTGTCGA TGCCCCGCGG TGCCCAGGTG
ATCTACCCGA AGGACTCGGC CCAGATCGTG GCGATGGGCG ATGTCTTCCC CGGCGCGCGG
GTCCTGGAGG CGGGGGCCGG TTCCGGCGCG CTGAGCTGCT CCCTACTGCG TGCCGTCGGC
CCCACCGGGG AGCTGCACTC GTGGGAGGTG CGCGACGACT TTGCGCAGAT CGCCCGACGC
AACGTCGAGG CCTTCTTCGG CGGCCCGCAC CCGGCCTGGC GACTGCGGGT CGGGGACGTG
GCGGCGAACC AGGAGACCGG GTTCGACCGG ATCATCCTGG ACATGCTCAC GCCCTGGGAG
AAGCTCGACA TGGTCGAGCG GGCCCTGGTA CCCGGTGGGG TGTTGATTGG CTACGTCGCC
ACCACCCCGC AGCTTTCCGA GCTGGTGGAG GCGCTGCGGG AACGGGGTGG CTGGACGGAG
CCGCGGGCCT GGGAGTCACT GGTCCGGGAC TGGCACGCGG AGGGGTTGGC CGTACGGCCC
GACCACCGCA TGATCGCACA CACCGCGTTC CTGGTGTCCG CGCGTAAGCT CGCCCCGGGC
GTTACTGCTC CGCCCCGTCG TCGTAAGCCC AGCAAGGGTA TGGAGGCATA CGCGCAGCGC
CGGGCGGCGC TGCGCGAGGC GGCAGCCGCC CAGGCCGGCT CGGCGGAGGA GGGATGA
 
Protein sequence
MTAPPSDAPD QHVPAPPPAR RGPFHPGDRV QLTDPKGRMH TVTLEPGKEF HTHRGILHHD 
ALIGQPDGSV VSTAGGGTAF LALRPLLADY VLSMPRGAQV IYPKDSAQIV AMGDVFPGAR
VLEAGAGSGA LSCSLLRAVG PTGELHSWEV RDDFAQIARR NVEAFFGGPH PAWRLRVGDV
AANQETGFDR IILDMLTPWE KLDMVERALV PGGVLIGYVA TTPQLSELVE ALRERGGWTE
PRAWESLVRD WHAEGLAVRP DHRMIAHTAF LVSARKLAPG VTAPPRRRKP SKGMEAYAQR
RAALREAAAA QAGSAEEG