| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2212 |
|---|
| Symbol | |
|---|
| ID | 5058675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2503680 |
|---|
| End bp | 2505242 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640474475 |
|---|
| Product | TAP domain-containing protein |
|---|
| Protein accession | YP_001159041 |
|---|
| Protein GI | 145594744 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.544179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGAC TCTTCGCTGG TACGACCGCC GTCGTACTGG GCCTCACGGC ACAGGTCATC
GCCGTCTCCC CGGTCGGGGC GGCACCAACA ACGGGCACCA CCGTCCGGCC GGCCAGCCCA
ATCGCCTGGT CCCCCTGCCC AGAGGACGAC CCGGTGATGG GGGAATACCT GGTAGGGCTG
GAGTGCGGCA CGCTCGCGGT GCCGCTTGAC CACTCTCGAC CGACCGGCCA GAAGATCACC
CTGGCGCTCA CCCGAGCCAA GCACACCGCG CCGGAATCCG AGTACCAGGG CGTCGTCCTG
CTGAACCGGG GTCAGTGGCC CGGCACCATC GGACGGGACC TACCCACCCG GTTCGCCAAA
GGCTGGAGCG GGCTGCCGAC CGACGTGGGT TCGACCTACG ACTGGATCGG GTTCGACCCC
CGCGGCGTGG GAGCAAGTGA ACCGTCAATC ACCTGCGACC CCACCTACCT GTATCCGGGC
GAAGCGCGGC CCGACTACCG ACCGAGCAGC CCCGCCGAGG AGAGGGTGTG GACGCGGCGG
GCCCGCACAT ACGCCGAAAG CTGCGGTGAG AAGTACGGCG ACACCCTCCG ACACTTCCGG
ACCACCGATA CCGCGCGGGA CATGGATCTC ATCCGAGCCG CGCTCGGTCA GAACAAGATC
AACTATCTGG GCTATTCCTA CGGCACCTAC CTCGGCTCGG TCTACGCCTC CCTGTTCCCG
AACCGGGTGC GCCGGATGGT GCTGGACAGT GTGGTGCAAC CAAGCACAGT CGGGTACGCC
TCGCTGTCAC GCACGAATGC GGCCTTCGAG AAGCGAGCTC AGATCTTCTT CAGCTGGATC
GCGGAGCACG ACTCGTACTA CCACCTGGGC GACACGACCG CGGAGGTCGA GGCGAACTAC
TACCAAGGCA TGGCCGCAGT CCGGGAGGCG CCGATCGACG GCCAGATCGG CCCGGCCGAG
TACAGCGACA TCTTCGCGGT GAACGTGTAT CGCAGCTACG TCTGGACCTA CCACGCACAG
GTGCTGGCCG ACTGGGTCCT GCGAGGTGAC CCGGCCGGAC TGAGGGACAA CTTCGGCGGC
GAACCCGGCT TCCCCGCACA GAACACCCAC GCCACGTACC GCACCGTGCA GTGTGTCGAC
GGCTACTGGC CCCAGCGCTG GAACCGTTGG CACACCGACC TGACCCGCCA GTACAACCGG
GGAGACCGCT TCATGACCTG GAACAGCGCG TGGTACAACG CTCCGTGCGC GTTCTGGCCG
GTGCCAGCCA GCCGACCGGC GAAGGTCGGC GACCGGAGCG CGAACATGTT GCTGATCCAG
GCGGAGCACG ACGCGCTCAC CCCGGTGGCC GGGGCCTACG AAACACACCG GCGGTTCCCG
AACTCTCGGC TGGTCCTGGA GCGCGGCGGC GTCTTCCACG GCGCCTCCCT GACCGCCAAC
GCCAACGGGT GCCTCAACAG CCACGTCACC GCCTACCTCC GAGACGGCAC CCGGCCGAGC
GCCACGACCG GCGTTGACGC CACCTGCGAC GCGAATCCCC TGCCAGATCC GGAAGCCGGC
TGA
|
|---|
| Protein sequence | MKRLFAGTTA VVLGLTAQVI AVSPVGAAPT TGTTVRPASP IAWSPCPEDD PVMGEYLVGL
ECGTLAVPLD HSRPTGQKIT LALTRAKHTA PESEYQGVVL LNRGQWPGTI GRDLPTRFAK
GWSGLPTDVG STYDWIGFDP RGVGASEPSI TCDPTYLYPG EARPDYRPSS PAEERVWTRR
ARTYAESCGE KYGDTLRHFR TTDTARDMDL IRAALGQNKI NYLGYSYGTY LGSVYASLFP
NRVRRMVLDS VVQPSTVGYA SLSRTNAAFE KRAQIFFSWI AEHDSYYHLG DTTAEVEANY
YQGMAAVREA PIDGQIGPAE YSDIFAVNVY RSYVWTYHAQ VLADWVLRGD PAGLRDNFGG
EPGFPAQNTH ATYRTVQCVD GYWPQRWNRW HTDLTRQYNR GDRFMTWNSA WYNAPCAFWP
VPASRPAKVG DRSANMLLIQ AEHDALTPVA GAYETHRRFP NSRLVLERGG VFHGASLTAN
ANGCLNSHVT AYLRDGTRPS ATTGVDATCD ANPLPDPEAG
|
|---|
| |