| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2208 |
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| Symbol | |
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| ID | 5058671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2499843 |
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| End bp | 2501612 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474471 |
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| Product | ABC transporter related |
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| Protein accession | YP_001159037 |
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| Protein GI | 145594740 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0484971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCA CTGCCCCTGA TGTGCCGGTA CGGCGCATCC TCAGGCTGTT CCGCCCGTAC
GGATGGAGCC TGGTACTCGT CGCCGGCCTG GTCGGCCTCT CATCTCTGTT CTTTCTGGTC
AACCCGTTCC TGATCCGAGA GATCCTGGAC GTGGCCCTAC CGGAGGGCCG GACGGGCTTG
CTCACCGTTC TCGCAGGTTG CATGCTCCTT GCGTCCGTCG CGAACAGCTC GGTCGTCGTC
TGGCAGACCT ACCTGTCCAC GAAGGTCGGC GAGCAGGTGA TGCATGATCT GCGCGCCGCC
GTCTACGGAC GCCTACAGCG GATGCCGCTG GCCTTCTTCA GCCGGACCCG CTCCGGCGAG
GTGCAGTCGC GCATCACCAA CGACATCGGC GACATGCAGG CCACGGTGAC CACCACCGCG
ACAACGCTGG TCTCCGACGT GACCGTGGTC GTGGCCACGG TCATCGGGAT GTTGGTGTTG
GATTGGCGGC TCACCATCGT GTCGCTGGTG ATGGTCCCGT TCTTCGTCTG GGTTGGGCGA
CGGGTCGGCA ACCAACGCCG CCGCATCACC CGCGAGCGGC AACGCCAGGC GGCGGCGATC
TCCGTGATCG TGCAGGAGTC GCTCTCCGTC AGCGGTGTGC TGCTGGCCCG GACGATGGGC
CGCTCCCGTT CGCTGACCGA CAGCTTCACG GCCGAGTCGC GCGTCCTGTC CGACCTGGAG
ATCCGCTCGC ACATGGCAGG CCGCTGGACG CAGGCAACGA CCTGGATCGT GTTGGCGTCG
ATGCCGGCGG CGACGTACTG GGTGGCGGGA CTGAACGGTC GCGGCGGCCA GGCGGCGATA
TCCATCGGCA CGTTGGTCGC CTTCACCACC TTGCAGCAGA CCCTGCTGCG GCCGGCGGTC
TCCCTGGTCG AGGTTGCCGT GGAGGTGCAG ACCTCACTCG TGCTGTTCGG CCGGATCTTC
GAGTACCTCG ACCTGCCCGT CGACCTCGGC GAGCCGACGG GTCCCGCCCC CTTCGCGAAG
CCGCGGGGAG AACTCCGACT CCGACAGGTC AGCTTCACGT ACCCCGGCGC GGACCGACCC
ACCCTCAGCG ACATCGACGT GGCGGTACCC GCCGGCCACA ACCTGGCGAT CGTCGGCGAG
ACCGGGTCCG GCAAGACCAC CCTCAGCTAC CTGGTCCCGC GGCTGTACGA CCCGACGTCG
GGGCAGGTGA CAATCGACGG CACCGACGTG CGGGACCTGC CCGCGGAGAC GCTGGCGGCC
GCCGTCGGGA TGGTGTTCCA GGAGACCTAC CTGTTCCATA CCTCGGTCGC CGAGAACCTG
CGGTTCGCCC GACCCGACGC GACCGACGAC GAGTTGGTGG CGGCCGCCAA GATCGCACAC
ATCCACGACC ACCTTCTGTC GCTGCCGGAC GGCTACAACA CTGTGGTGGG CGAGCGGGGG
TTCCGGTTCT CCGGCGGGGA ACGGCAGCGC CTGGCGATCG CCCGGGCGGT CCTGCGGGAC
CCACCGATCC TGGTGCTCGA CGAGGCGACC AGTTCCCTGG ACAACCAGAC CGAAGAGGCC
GTCACGCGGG CCATCGACGC AGCCAGCGCC GGGCGTACCA CGATCACGAT CGCGCACCGG
CTGTCGACGA TCCGCGACGC GGACGAGATC ATCGTGTTGG ACGCGGGCAC CATCGTCGAA
CGCGGCACCC ACGCCGAGCT CCTGGAACTG GGGGGTCACT ACGCACTGCT CGTCAGCCGT
GAGGTCGAGG TGCCGGCAGA CGCCCGATAG
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| Protein sequence | MTTTAPDVPV RRILRLFRPY GWSLVLVAGL VGLSSLFFLV NPFLIREILD VALPEGRTGL
LTVLAGCMLL ASVANSSVVV WQTYLSTKVG EQVMHDLRAA VYGRLQRMPL AFFSRTRSGE
VQSRITNDIG DMQATVTTTA TTLVSDVTVV VATVIGMLVL DWRLTIVSLV MVPFFVWVGR
RVGNQRRRIT RERQRQAAAI SVIVQESLSV SGVLLARTMG RSRSLTDSFT AESRVLSDLE
IRSHMAGRWT QATTWIVLAS MPAATYWVAG LNGRGGQAAI SIGTLVAFTT LQQTLLRPAV
SLVEVAVEVQ TSLVLFGRIF EYLDLPVDLG EPTGPAPFAK PRGELRLRQV SFTYPGADRP
TLSDIDVAVP AGHNLAIVGE TGSGKTTLSY LVPRLYDPTS GQVTIDGTDV RDLPAETLAA
AVGMVFQETY LFHTSVAENL RFARPDATDD ELVAAAKIAH IHDHLLSLPD GYNTVVGERG
FRFSGGERQR LAIARAVLRD PPILVLDEAT SSLDNQTEEA VTRAIDAASA GRTTITIAHR
LSTIRDADEI IVLDAGTIVE RGTHAELLEL GGHYALLVSR EVEVPADAR
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