Gene Strop_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2184 
Symbol 
ID5058647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2471575 
End bp2472402 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content69% 
IMG OID640474447 
Productpeptidase C26 
Protein accessionYP_001159013 
Protein GI145594716 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.297323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCAA CGTGGAACGA ATTCGAGGCA CGGCCAGTGA TTGGAATCTG CGCACGAACG 
GCCCCGGTGA CGGTGCAGGG GCTCGACATG ACAGTCAGCC TGGCGCTGCA GGCCCACGTG
GACATGCTCG CCACCGCAGG GTGCACCCCC CTGTTGGTTC CACTGCTGCC GGGTGCCGAG
GACCTCGTGC CACGACTCGA CGGCCTCCTG CTGCCCGGGG GGCCAGACCT GGACCCGGAG
TTGTACGGGC AGCCCCAACA CTCCAGGACC TGGTGCGGCA GCACCGCCGC GGACCGGGTT
GAACTGACCC TGCTCCGGGC AGCGCTTGAC GCCGGCCGGC CGGTCCTGGC CATCTGCCGC
GGGATGCAGG TGCTCAACGT GTTGTCGGGA GGGACGCTGC ACCAGCACCT GCCCGAGGTC
GTCGACCATG ATGGCCACTG CCCCCAGACC GCGACCTTCA CCCTCGGCTG GAACCGGCTC
AACCTCCAGC CTGGCAGCCT CGCCGCCGCT GCCTACGGCA CCGATGTCCC GACTGTCGCC
TGCCACCACC ACCAGGGTGT CGACCGGGTT GGTGCGGGTC TCTCCGTGAC CGCCCGGGCA
TCGGACGGGG TCATTGAGGC GATCGAGGCG ACCGGGCACC CGTTCGTGCT CGGGGTGCAG
TGGGAGGCCG GGCAGGACTC CGACTCGCGA CTGCACCGCG CGCTCGCCGA CGCCGCCGGA
CGTACGAGAC AACGACCCTC AACCCCGGGA GAATCTGATG GCATCGCGGA TGAACAACCC
GTCTCTGGTC GTACCCGACG CGCTGCCGCC CCTACTCGAA CTGGGTAA
 
Protein sequence
MSSTWNEFEA RPVIGICART APVTVQGLDM TVSLALQAHV DMLATAGCTP LLVPLLPGAE 
DLVPRLDGLL LPGGPDLDPE LYGQPQHSRT WCGSTAADRV ELTLLRAALD AGRPVLAICR
GMQVLNVLSG GTLHQHLPEV VDHDGHCPQT ATFTLGWNRL NLQPGSLAAA AYGTDVPTVA
CHHHQGVDRV GAGLSVTARA SDGVIEAIEA TGHPFVLGVQ WEAGQDSDSR LHRALADAAG
RTRQRPSTPG ESDGIADEQP VSGRTRRAAA PTRTG