| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2178 |
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| Symbol | |
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| ID | 5058641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2466328 |
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| End bp | 2467164 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640474441 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001159007 |
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| Protein GI | 145594710 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAGGG ACCAGACACT TTTACGCTTC GGGCTGCTCG GCCCACTCTC GCTTCACTTT
CGTCGCACGC CGGTGGAGAC CAGCGCACCC AAACAACGTC AGGTGCTCGC CCTACTCGCA
TTGAACGTCG GACGCGTCGT CACCGTGCCG ATGCTCATCG AGGAACTGTG GGGAGACCGT
CCACCACGAA GCCACGCCAC AACCTTGCAG ACATACATTT TGCAGCTGCG AAACGCACTC
GCGACGGCCG GGTACGGCAG TCCGGAAGCT CGGCAGATAA TCGGCACCCG CCACAACGGC
TATCTACTCG AGGGCGTCGC GTGCAAAACA GACGTCGAAG TCTACAACCG GCACCTTGCC
GCCGGTCGCA CCGCGGCCGA GGCAGGCGAC CAGCACCGCG CCTCGCAGGA GTTCAGCCAC
GCACTCCAGG TCTGGCGCGG TTCAGCCTTA GTTGATGTCC GATTGGGCCC GATTCTGGAA
ATCGAGGCGG CATCACTGGA GGAGAGCCGA CTCTGCGCGC TGGAACGCCG AATCGAAGCA
GACCTGGCCC TGGGCCGGCA CTCCGACCTG CTGGCCGAAC TAACGCTTGT CACCGCACGG
AACCCGATGA ACGAAAACCT GTGCGCACTA CGAATGATGG CCATGTACCG TGCCGGTCAC
GTTGGGCGCT CACTTCAGGC ATACCATCGT CTCCGTTCTA TCCTGAACGA AGAGCTCGGT
GTCGAACCGG GACCACGGGT ACAGCGACTC CTGGCAGCCA TCCTCGCGGG CGATCCGGGA
CTGGAGGAGG CGTCACCGCT GTCGCCTCCC AACCAATTCA CTGTGCGCCA TCCCTGA
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| Protein sequence | MERDQTLLRF GLLGPLSLHF RRTPVETSAP KQRQVLALLA LNVGRVVTVP MLIEELWGDR
PPRSHATTLQ TYILQLRNAL ATAGYGSPEA RQIIGTRHNG YLLEGVACKT DVEVYNRHLA
AGRTAAEAGD QHRASQEFSH ALQVWRGSAL VDVRLGPILE IEAASLEESR LCALERRIEA
DLALGRHSDL LAELTLVTAR NPMNENLCAL RMMAMYRAGH VGRSLQAYHR LRSILNEELG
VEPGPRVQRL LAAILAGDPG LEEASPLSPP NQFTVRHP
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