| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2171 |
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| Symbol | |
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| ID | 5058634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2456547 |
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| End bp | 2460050 |
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| Gene Length | 3504 bp |
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| Protein Length | 1167 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474434 |
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| Product | methionine synthase |
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| Protein accession | YP_001159000 |
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| Protein GI | 145594703 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.657352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACG CGCTGACCGA CCGGATCCTC GTCGCCGACG GGGCGATGGG GACCATGTTG
CATGCGGCAG ACCTGACTCT CGATGACTTC GACGGACTGG AGGGCTGCAA CGAAATCCTC
AACGTGACCC GGCCGGACGT TGTCCGTGGC GTGCACGAGG CGTACCTGGC CGTGGGTGCA
GACTGCGTGG AAACCAACAC ATTCGGTGCC AACCTGGCCA ACCTGGCCGA GTATGGCATT
GAGGGGCGCA TCCGCGAATT GTCCGAGGCC GGCGCCCAGC TGGCCCGCGC CGCCGCCGAC
GCGTACGCGA CGCCGGAGCA GCCCCGCTTC GTCCTCGGCT CGATCGGGCC GGGCACGAAG
CTGCCCACCC TCGGCCACGC CGCGTATACG ACGCTGCGGG ACGCGTACCA GGAGAACGCC
GTCGGCCTGA TCGCCGGCGG ATCGGATGCG CTGATCATTG AGACCTGCCA GGACCTGCTT
CAGGTGAAGG CGGCGGTGAT CGGCTCGAAG CGGGCGATGG CCGAGCTGGG CCGATCGGTC
CCGATCATCT GTCACATGGC GGTGGAGACC ACCGGCACGA TGCTGCTCGG CAGCGAGATC
GGTGCCGCGC TCACCGCGAT CGAGCCACTT GGCATCGACC TGATCGGGCT GAACTGCTCC
ACCGGCCCGG CGGAGATGGG TGAGCACCTG CGCTACCTGT CACAGCATTC CCAGATTCCC
GTGTCGGTGA TGCCGAACGC CGGCCTGCCG GTCCTCACCT CCGACGGTGC GTACTTCCCG
CTGACGCCGG ACGAGATGGG CGACGCCCTG GAGCAGTTCG TCACCGACTA CGGTGTGGCG
CTTGTCGGCG GCTGCTGCGG GACCACACCG GAGCATATCC GGGTGCTGGC AGAACGGATG
CGTGGCCGGC CGCCGGTGGT GCGGGAGCCC CGGCCCGAGC CCGGTGCCTC GTCGATTTAT
CACCATGTCC CCTTCGCGCA GGACGCGAGC GTCCTGATGG TGGGGGAGCG GACCAACGCC
AACGGGTCCA AGGCGTTCCG TGAGGCCATG CTCGCCGGGG ACTGGCAGGC GTGCGTCGAG
ATCGCCCGTA GCCAGGCGCG GGACGGCTCG CACCTGCTGG ACCTCTGCGT GGACTACGTG
GGCCGCGACG GCACCCAGGA CATGCGCGAG CTGGCCAGCC GGTTCGCCAC CGCCTCCACG
TTGCCGATCA TGCTGGACTC GACCGAACCG GGCGTGATCG AGGCAGGGCT GGAGACGCTT
GGTGGGCGAT GTGTGGTCAA CTCGGTCAAC TTCGAGGACG GCGACGGCCC CGACTCCCGG
TATGCCCGCC TGATGCCCGT GGTTAAGGAG CACGGCGCGG GGGTGGTGGC GTTGCTCATC
GACGAGGAGG GCCAGGCGCG CACCCAGGAC TGGAAGGTAC GCGTGGCCGC CCGGCTGATC
GACGATCTGA CCGGCCGTTG GGGAATGGCC CGGTCGGACA TCCTGATCGA CGCCCTGACC
TTCCCGATCG CCACTGGGCA GGAGGAGACC CGGCGTGACG GGATCGAGAC CATCGAGGCG
ATCCGGGAGA TCGCTGCCCG TTACCCGGGA GTCAACTTCA CCCTGGGCAT CTCCAACGTC
TCGTTCGGCC TCAACCCGGC CGCCCGGCAG GTGCTCAATT CGGTGTTCCT GCACGAGTGC
GTCCAGGCCG GACTGACCTC GGCGATCGTG CACGCCAGCA AGATCCTGCC GATGTCGAAA
ATTCCGGATG AGCAGCGGGA GATCGCGCTC GATCTGGTCT ACGACCGACG CCGTGAAGGG
TACGACCCGG TCCAGCGCTT CATCGAAGCC TTCGAGGGGG TGGATGCCGC CTCGGCGCGG
GCCAGCCGAG CGGAGGAACT GGCCGCGCTA CCGCTGGAGG AGCGGCTCAA GCGTCGGATC
ATCGACGGCG AGCGCAACGG TCTCGAGGCC GATCTGGATG CGGCCCTCGC CACCGGCCTG
GCGGCGATGG CCGTTATCAA CGACATTCTG CTGGACGGGA TGAAGGTGGT CGGCGAGCTG
TTCGGGGCCG GGCAGATGCA GCTGCCGTTC GTACTCCAGT CCGCCGAGGT GATGAAGTCC
GCGGTGGCGT ACCTGGAGCC GCACCTGGAG AAGGCCGACG ACGGCGGCAA GGGACGGATC
GTGCTCGCCA CCGTGAAGGG CGACGTACAC GACATCGGCA AGAACCTGGT CGACATCATC
CTGTCGAACA ACGGCTACGA GGTGGTGAAC ATCGGGATCA AGCAGCCGAT CAACGCCATC
CTCGACGCCG CCGAGCAGAA CCGCGCGGAC GCGATCGGCA TGTCGGGGCT GTTGGTGAAA
AGCACCGTCA TCATGAAGGA GAATCTGGTC GAGATGGCCA CGCGGGGCGT CGCGGAGCGT
TGGCCGGTCC TGCTTGGGGG CGCGGCGCTG ACCCGGGCGT ATGTCGAGGA CGACCTGCGA
TCGATGTTCC CCGGCCAGGT GCACTATGCC CGGGATGCCT TCGAAGGGCT CTCCCTGATG
GACCGGGTGA TGGCCGCCAA GCGCGGTGGC GCACAGGTGG TGGACCCGGA ACGGGAGGCG
GCCCTGGCCG CGCGGCGGGA GCGGCGGGCG CGGCAGCGGG CGATCGTCAG CGAGTCGTTG
CCGGAGCTGA ACGATTCCTC GGTCCGTTCC GACGTGGCCA CCGATGTGGA GGTGCCCACC
CCACCGTTCT TCGGCACCCG AGTGGTGAAG GGGCTGCCGC TCGCCGACTA CGCGGCGCTG
CTCGACGAGC GGGCGACGTT CCTCGGGCAG TGGGGACTAC GCGGTACCCG CGGCGGCAAG
GGCCCGACCT ACGAGGAGCT GGTGGAGACC GAGGGTCGGC CGCGGCTGCG CTACTGGCTG
GACCGGCTCA TCGCCGACCA GGTACTTGAG GCGGCTGTCG TGTACGGCTA CTTTCCGGCG
TACTCCGACG GCAACGACCT GGTCGTGCTC GACGAGAACG GGCACGCGGA GCGGGCCCGG
TTCACCTTCC CGCGGCAGCG CCAGGAGCGG CGGCTCTGCC TGGCCGACTT CTTCCGTCCT
CGCGGTGGCG AGCTTGACGT GGTGACGTTG CAGTTGGTCA CCGTCGGCCA ACCGATCAGC
GAATACACGG CGAAGTTGTT CGCCCGCAAC GAGTACCGCG ACTATCTGGA GGTTCATGGG
CTGTCGGTGC AGCTCACCGA GGCCCTTGCC GAGTACTGGC ACCAGCGGGT CCGCGCCGAG
CTGAGGCTGC CCGAGGACCG TACGGTGGCC ACCGCCGACC CGGCCGACCT GGCTGGGTTG
TTGCGTACCG AGTACCGGGG TTGCCGGTAT GCCTTCGGCT ACCCGGCCTG CCCCGACCTG
GAGGATCGGG CGAAGCTTGT GGACCTGTTG GGGGCGGAGC GGATCGGCGT GCAACTGTCG
GAGGAGTTCC AGCTCGTTCC GGAACAGGCC ACCGACGCGA TTGTCGTGCA TCATCCGGAG
GCGAGCTACT TCAACGCCAA GTGA
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| Protein sequence | MLDALTDRIL VADGAMGTML HAADLTLDDF DGLEGCNEIL NVTRPDVVRG VHEAYLAVGA
DCVETNTFGA NLANLAEYGI EGRIRELSEA GAQLARAAAD AYATPEQPRF VLGSIGPGTK
LPTLGHAAYT TLRDAYQENA VGLIAGGSDA LIIETCQDLL QVKAAVIGSK RAMAELGRSV
PIICHMAVET TGTMLLGSEI GAALTAIEPL GIDLIGLNCS TGPAEMGEHL RYLSQHSQIP
VSVMPNAGLP VLTSDGAYFP LTPDEMGDAL EQFVTDYGVA LVGGCCGTTP EHIRVLAERM
RGRPPVVREP RPEPGASSIY HHVPFAQDAS VLMVGERTNA NGSKAFREAM LAGDWQACVE
IARSQARDGS HLLDLCVDYV GRDGTQDMRE LASRFATAST LPIMLDSTEP GVIEAGLETL
GGRCVVNSVN FEDGDGPDSR YARLMPVVKE HGAGVVALLI DEEGQARTQD WKVRVAARLI
DDLTGRWGMA RSDILIDALT FPIATGQEET RRDGIETIEA IREIAARYPG VNFTLGISNV
SFGLNPAARQ VLNSVFLHEC VQAGLTSAIV HASKILPMSK IPDEQREIAL DLVYDRRREG
YDPVQRFIEA FEGVDAASAR ASRAEELAAL PLEERLKRRI IDGERNGLEA DLDAALATGL
AAMAVINDIL LDGMKVVGEL FGAGQMQLPF VLQSAEVMKS AVAYLEPHLE KADDGGKGRI
VLATVKGDVH DIGKNLVDII LSNNGYEVVN IGIKQPINAI LDAAEQNRAD AIGMSGLLVK
STVIMKENLV EMATRGVAER WPVLLGGAAL TRAYVEDDLR SMFPGQVHYA RDAFEGLSLM
DRVMAAKRGG AQVVDPEREA ALAARRERRA RQRAIVSESL PELNDSSVRS DVATDVEVPT
PPFFGTRVVK GLPLADYAAL LDERATFLGQ WGLRGTRGGK GPTYEELVET EGRPRLRYWL
DRLIADQVLE AAVVYGYFPA YSDGNDLVVL DENGHAERAR FTFPRQRQER RLCLADFFRP
RGGELDVVTL QLVTVGQPIS EYTAKLFARN EYRDYLEVHG LSVQLTEALA EYWHQRVRAE
LRLPEDRTVA TADPADLAGL LRTEYRGCRY AFGYPACPDL EDRAKLVDLL GAERIGVQLS
EEFQLVPEQA TDAIVVHHPE ASYFNAK
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