Gene Strop_2166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2166 
Symbol 
ID5058629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2451621 
End bp2452211 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content70% 
IMG OID640474429 
Producthypothetical protein 
Protein accessionYP_001158995 
Protein GI145594698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0132196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC AGGTGCACGC CTTCGAGCCG CCGGAGCGGT TCGTCGCCGG AACCGTCGGG 
CCGCCGGGGG ATCGCACGTT CTTCCTCCAG GCCCGCGGCG GTGGCCGGCT GGTCAGCGTC
GCGCTGGAGA AGGTCCAGGT CTCACTGCTG GCGGAGAAGC TGGAGGAGCT GCTCTCCGAG
GCGCAACGGC GGTTTGGGGT GAAGCTGCCG GAGACCGGTC CGGTCGGTGG CGACAATGAC
CCGCTGGATA CGCCCGTCGA TGAGGAGTTT CGGGTCGGCA CCCTGGGACT GGCCTTTGAC
GTGGACACCG AGACGGTCGT GATCGAGGCG ATCGCGGTCG GCGAGGCCGA GGTTGGGGCC
GCGGCTGAGG CCGAGGTCGA GTTGGACGAG TCGGACGACG AGGAGTCCGC CGACGAGTCA
GACGAAGACC TGGACCGGCT GCGCGTGCGG TTGACCCCGG AGGCGACCCG CGAGTTCATC
GGACGGGCCC GGCGGGTGAT AAACGCCGGC CGGCCACCGT GTCCGCTCTG TGGTCAGCCC
CTGGACCCGG TCGGTCACCT CTGCCCGCGC CACAACGGCT ACCACCGGTG A
 
Protein sequence
MTHQVHAFEP PERFVAGTVG PPGDRTFFLQ ARGGGRLVSV ALEKVQVSLL AEKLEELLSE 
AQRRFGVKLP ETGPVGGDND PLDTPVDEEF RVGTLGLAFD VDTETVVIEA IAVGEAEVGA
AAEAEVELDE SDDEESADES DEDLDRLRVR LTPEATREFI GRARRVINAG RPPCPLCGQP
LDPVGHLCPR HNGYHR