Gene Strop_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2148 
Symbol 
ID5058611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2433600 
End bp2433998 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content69% 
IMG OID640474411 
Productzinc finger, DksA/TraR C4-type 
Protein accessionYP_001158977 
Protein GI145594680 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.167066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.282814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCC ACGACCCGGT CGACACGCCC CGACCCCAGG CGGAGGCCGA CCAGATCCGG 
CAGTCCCTGA AGGCCCGCTA CGACGAGCTC GCCGCCGAGT ACGAGCAGGC CGTGTTGCAA
AGCCAGGTGC TGCGCCTGGT CGAGGTCGGG GACACCGCGG GCGATGACCA GGCCGACAGC
GGCACGAAGA CCGCGGAGCG GGACACCGCG CAGTCTCTGT TGCGCACGAT CCTCGACCGC
CGGGCACAGT TCGAGCACGC TCTGACCCGG CTGGAAGAGG GCACCTACGG CTTCTGCGAG
GGCTGTGGCG CGTCTATTCC GGTGGAGCGG TTGGAGATCT TCCCGTCGGC GACGACCTGC
GTGACCTGCA AACAAACTCG GGAGCGTCGC GCGGCTTGA
 
Protein sequence
MLVHDPVDTP RPQAEADQIR QSLKARYDEL AAEYEQAVLQ SQVLRLVEVG DTAGDDQADS 
GTKTAERDTA QSLLRTILDR RAQFEHALTR LEEGTYGFCE GCGASIPVER LEIFPSATTC
VTCKQTRERR AA