| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2143 |
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| Symbol | |
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| ID | 5058606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2426082 |
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| End bp | 2428079 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640474406 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001158972 |
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| Protein GI | 145594675 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0607375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.164651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC GGGTCACCAC GGAACCACGC GACCGGGGTC CGGCGATCCT GGCACCGGCC
CGCTTCGGCG GCTACCCGGG CCCGCGGCGG CCGGCGTTGC CCGGCACCAA GCTGGCCCGG
TGGCTGGCCA CCACCGACCA CAAGCAGATC GGGCTGCTCT ACCTGATCAC GGCCTTCGGA
TTCTTCGTGC TGGCCGGAAT CGAGGCGATG CTGATCCGGG GCGAGTTGGC CCGGCCCGGG
CTCCAGTTCC TCTCTCCCGA ACAGTACAAC CAGTTGTTCA CCACCCACGG CCTCGCGATG
CTGCTGCTCT TCGCCACCCC GGCGGCGCTG GGGATGGCCA ACTACATCGT CCCGATCCAG
GTCGGCGCGC CGGACGTCGC GTTCCCCCGA CTGAACGCCT TCGGCTACTG GCTCTTCCTC
TTCGGCGGTC TGCTGCTCTT CGGCAGCTTC CTGACCCCCG GCGGATCCGC CGACTTCGGC
TGGTTCGCAT ACACGCCGCT GAGCCAGGCC GAGCACTCCC CCGGGATCGG CCCGGACATG
GTGCTGGTCG GCCTTGCCCT CGGCGGTGTC GGCACGATTC TGACCGCGGT CAACCTGATC
ACCACCATCG TCACGCTCCG GGCCCCCGGC ATGACGATGT TCCGAATGCC GATCTTCACC
TGGAACATGC TCTTCACCAG CATCCTGATC CTGCTGGTCT TCCCCCTGCT GGCCGCCGCG
CTCTTCGCCC TGCTCGCGGA CCGACTCCTG GGGGCGCACG TCTTCGATTC GAACCATGGC
GGGCCGCTGC TCTGGCAGCA CCTGTTCTGG TTCTGGGGCC ACCCCGAGGT CTACATCATC
GCGGTGCCCT TCTTCGGGAT CATCACCGAG ATCATCCCGG TCTTCGCCCG CAAGCCCGTC
TTCGGCTACA CCGGGCTGGT CTTCGCCACC GTCGCCATCA CCGTGCTGTC CATGGCGGTC
TGGGCACACC ACATGTTCGG CACCGGTCAG GTGCTCCTGC CGTTCTTCAG CATCCTGAGC
TACCTGATCG CCGTACCGAC CGGGGTGAAG TTCTTCAACT GGATCGGCTC CATGTGGAAG
GGGCAGCTCA CTTTCGAAAC ACCGATGCTC TTCGCCATCG GCTTCCTGGT CACCTTCCTG
TTCGGCGGTC TCACCGGGGT GCTGCTGGCC AGCCCGCCGG TGGACTTCCA CGTGACCGAC
AGCTACTTCG TGGTGGGGCA CTTCCACTAC GTACTCTTTG GCACAGTGGT CTTCGCCTTC
TTCGGCGGAA TCTACTTCTG GTTCCCGAAG ATGACCGGCC GGCTACTCGA CGAACGACTC
GGCAAGGTGC ACTTCTGGAC GATGTTCCTC GGCTTCCACG GCACCTTCCT GGTCCAGCAC
TGGCTGGGCA ACGAGGGAAT GCCCCGGCGG TACGTCGACT ACCTGTCCAG CGACGGGTTC
ACCACCCTGA ACACCATCTC CACCGTCTCT TCGTTCGTAC TCGGAGCATC CACCCTGTTC
TTCATCTGGA ACGCCTGGAA GTCCTGGCGG TACGGACCCG TGGTCAACGT GGACGACCCA
TGGGGCTTCG GTAACTCCCT GGAGTGGGCG ACAACCTGTC CACCACCACT GCGTAACTTC
GACCAGATGC CCCGGATCCG CTCGGAGCGC CCGGCCTTCG ACGCCAAGTA CGGTCCACTC
GTCGCCGATC TCGGCCGCGA TCTACCGCAG CGCACCACCC GGCCGCCCCA GACCCTCCGC
GACGAGCTAC ACCGGGAGCC GCATCTGCCC GAGTCACCCA GCACCGAGGG CGCGGTCGGC
GCGCGCGAGG CGGTGGCCTA CCAGCCCGCT CCCCAGTCCG GGGCGCGGCC GGTCGAGGTG
CCGGAGCCGG AGGCCGTGCG CCGGCCCAGC TTCGAGGAGA CCGACGAGCC CGAGGGGACC
ATCGACCTCG AAGCCCCGCA GGAGCCGAAC GACCGGTGGC GCCATCCACG TGGACCCGGC
GACAGCACCG AGAACTGA
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| Protein sequence | MPKRVTTEPR DRGPAILAPA RFGGYPGPRR PALPGTKLAR WLATTDHKQI GLLYLITAFG
FFVLAGIEAM LIRGELARPG LQFLSPEQYN QLFTTHGLAM LLLFATPAAL GMANYIVPIQ
VGAPDVAFPR LNAFGYWLFL FGGLLLFGSF LTPGGSADFG WFAYTPLSQA EHSPGIGPDM
VLVGLALGGV GTILTAVNLI TTIVTLRAPG MTMFRMPIFT WNMLFTSILI LLVFPLLAAA
LFALLADRLL GAHVFDSNHG GPLLWQHLFW FWGHPEVYII AVPFFGIITE IIPVFARKPV
FGYTGLVFAT VAITVLSMAV WAHHMFGTGQ VLLPFFSILS YLIAVPTGVK FFNWIGSMWK
GQLTFETPML FAIGFLVTFL FGGLTGVLLA SPPVDFHVTD SYFVVGHFHY VLFGTVVFAF
FGGIYFWFPK MTGRLLDERL GKVHFWTMFL GFHGTFLVQH WLGNEGMPRR YVDYLSSDGF
TTLNTISTVS SFVLGASTLF FIWNAWKSWR YGPVVNVDDP WGFGNSLEWA TTCPPPLRNF
DQMPRIRSER PAFDAKYGPL VADLGRDLPQ RTTRPPQTLR DELHREPHLP ESPSTEGAVG
AREAVAYQPA PQSGARPVEV PEPEAVRRPS FEETDEPEGT IDLEAPQEPN DRWRHPRGPG
DSTEN
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