| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2140 |
|---|
| Symbol | |
|---|
| ID | 5058603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2422214 |
|---|
| End bp | 2423338 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640474403 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158969 |
|---|
| Protein GI | 145594672 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.082698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTGT CCTTCCTACG CCCGCTCTAT GATCGGCCGG GCCCGTGGTG TTCGGTGTAC
CTGGACGCCT CCGCCGACAC CGAGGACGCC CACGCCGCGC TGGACCTGCG CTGGCGGGCG
CTCCGGGACC GACTCCAGGA GCAACGGGCC GACCCGGCGT CGATCGAGGC GATTGATCGG
GTGGTTCGGG GGCATAACCC GATGCCGGGT GACTACGGCA TCGCCGTCTT CGCCAGCCAC
GGTCGGGTGG CCCTGTCGGA GTACCTGTCT GCTCCGCCGC TGCGGGACAT CGCCGCGTTC
GCGTCACTGC CACACGTGAT GCCGCTGCTG GCCCAGCGAG GCGAGCAGGT GGCCTGGGTG
CGCGTGATCG CCGACCGGAC CGGAGCGGAC GCGATGGCGG TCAGCGCGGG GGGTGTGCCA
CGGCACGCCC ACGTGCAGGG CCGGGAGGAG TACCAGCTGC GCCGCGTACG GCCCGGCGGT
TGGTCCCAGT CCCGGTATCA GCGGGCCGCT GTGGAGGCCT GGCACCGCAA CGCGGGTGAC
ATCGCCGCCG CCGCCGCGGA GCTGGCCGAG AGGGTACGCG CCGACGTGGT GGTGGTGGCC
GGAGATGTGC GGGCCACCGG TGTGATCGCC GCGCAGTTGC CGGAACGCTG GCAGGAGGTG
CTGGTCCGTA CCGATGCCGG CAAGCGGGCC GACGGCGCCG ACCACACCCT GCTGGACGAC
CTGACCGTGC AGGCCATTGC CGAGGTGGCC GACCAGCGGG TCAGTACCGC CCTGGACCGG
TTTGGTCAGC AGGAGGAGGT CGGGTCCGGG CTGGACGCGG TGGTCTCCGC ACTGCAGCGG
GACCAGGTCG AGAACCTGCT CATCGTGGAC GACCCGTCGG CGACGGGAGA GCTGTGGGTG
GGGTCGGATT CCACCCAGAT CGCTACTGAT CCGGAACAAC TATCCGCCAT GTCGGTCCGG
GACCCGGAGC AGGTACGCGT GGATGCCGCC CTGGTACGGG CGTTGGTGGG GACTGACGCG
GAGCTGACCG TCCTCAGCCC CGACGAGGCG CCGGAGTTGA CCGGTGGGGT GGGCGCGGTA
CTGCGGTACG TCGATGTCGC CACGCCGGGG CGGGACCGCG CCTGA
|
|---|
| Protein sequence | MQLSFLRPLY DRPGPWCSVY LDASADTEDA HAALDLRWRA LRDRLQEQRA DPASIEAIDR
VVRGHNPMPG DYGIAVFASH GRVALSEYLS APPLRDIAAF ASLPHVMPLL AQRGEQVAWV
RVIADRTGAD AMAVSAGGVP RHAHVQGREE YQLRRVRPGG WSQSRYQRAA VEAWHRNAGD
IAAAAAELAE RVRADVVVVA GDVRATGVIA AQLPERWQEV LVRTDAGKRA DGADHTLLDD
LTVQAIAEVA DQRVSTALDR FGQQEEVGSG LDAVVSALQR DQVENLLIVD DPSATGELWV
GSDSTQIATD PEQLSAMSVR DPEQVRVDAA LVRALVGTDA ELTVLSPDEA PELTGGVGAV
LRYVDVATPG RDRA
|
|---|
| |