Gene Strop_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2103 
Symbol 
ID5058566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2376888 
End bp2377619 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID640474366 
Producthypothetical protein 
Protein accessionYP_001158932 
Protein GI145594635 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000719716 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.302438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTGG TATCACTGGT GCCGTCGTTG ACCGAGGCGG TGGCGTTGAC GTTGCCCGGG 
ACGCTGGTCG GCGCTACCGA CTGGTGCGCC CACCCGATTG GCCTGGACGT GCCCCGGGTC
GGCGGCAGCA AGTACCCGGA CCTGGACCGG GTACGCGCGC TTCGGCCGGA CGTGGTCCTG
CTCAACGTCG AGGAGAACCG GCGCGAGGAC GCGGACGCCC TGGTGGCGGC GGGGGTACCG
GTGCGGGTCA CCTACCCTCG TACCGTCGAT GAGGCGCTCA CCGAGTTGGC CGAGCTACTC
ACCGAGTTAG GTTCGCCGGG TGAACCCGAG TGGTTGGTGG CCGCTCGCCG CGCCTGGGCG
GAGCTACCCG AGGACAGGCC CCCACGCCGA GCCGTGGTGC CCGTCTGGCG ACGCCCGTGG
GTGGCGCTGG GCCGGGACAC CTTCGCCGGG GACGTGCTTC GCCGGCTGGG GCTGACCAAC
CTGTACGCGG ACCACGCCGA GCGGTATCCC CGGCCGCCCC TGAACGAGCT ACGCGGCCGG
GCTCCTCAAC TGGTCGTGTT GCCCGACGAG CCGTACCGTT TCACCGCGAA TGACGGGCCG
GAGGCATTCC CCGAGCTGCC GTGTGCCCTC GTCTCCGGTC GGCACCTGAC CTGGTATGGC
CCATCCCTGG TGGAAGCGCC CGCGGTCCTG GCCGCCCAGC TGGCGGCGCC GGTCACCCAC
GTGGCGGGCT GA
 
Protein sequence
MRVVSLVPSL TEAVALTLPG TLVGATDWCA HPIGLDVPRV GGSKYPDLDR VRALRPDVVL 
LNVEENRRED ADALVAAGVP VRVTYPRTVD EALTELAELL TELGSPGEPE WLVAARRAWA
ELPEDRPPRR AVVPVWRRPW VALGRDTFAG DVLRRLGLTN LYADHAERYP RPPLNELRGR
APQLVVLPDE PYRFTANDGP EAFPELPCAL VSGRHLTWYG PSLVEAPAVL AAQLAAPVTH
VAG