| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2101 |
|---|
| Symbol | |
|---|
| ID | 5058564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2375691 |
|---|
| End bp | 2376068 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640474364 |
|---|
| Product | peptidylprolyl isomerase, FKBP-type |
|---|
| Protein accession | YP_001158930 |
|---|
| Protein GI | 145594633 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0147755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.282814 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCAGG CAGCGAAGCC CGAGGTGGGA CCGATCGAAG GCGCCCCGCC GAGCGAGCTC
CTCGTCGAGG AGATCACGGT CGGCGAGGGA GCGGAGGCGC AAGCCGGGCA GATCGCCCGC
GTCCACTACG TCGGCGTCGC GCACTCCACG GGCCGTGAGT TTGACGCGTC GTGGAATCGT
GGCGAGCCGC TCGAGTTCCC CCTCGGGGGC GGGCGGGTCA TCGCCGGCTG GGACCAGGGT
GTCGTCGGTA TGCGAGTCGG TGGCCGGCGG CGACTGACCA TCCCGCCGCA CCTCGGTTAC
GGCGACCGCG GCGCCGGCGG CGTCATTCGG CCGAACGAGA CGCTGGTCTT TGTCGTTGAC
CTGCTCGACC TCCGCTGA
|
|---|
| Protein sequence | MNQAAKPEVG PIEGAPPSEL LVEEITVGEG AEAQAGQIAR VHYVGVAHST GREFDASWNR
GEPLEFPLGG GRVIAGWDQG VVGMRVGGRR RLTIPPHLGY GDRGAGGVIR PNETLVFVVD
LLDLR
|
|---|
| |