Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2100 |
Symbol | |
ID | 5058563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2374325 |
End bp | 2375608 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474363 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001158929 |
Protein GI | 145594632 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0449665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.352624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA GGCGGCGAAT GACGCTGCTC GCGGTAACTG TCGCGGCCGT ACCGGTAGCG CTCGGAGGGT GCACCATCGG CGGGCGCGAG GAGGCCCGAC CGGCACCGCC GGAACTAACC GTGACGCCGA CCGACCAGAC CTCGGACGTT CCGATCAGCG CCGAGGTCGG CACCACGGTC AAGGGCGGGA CGATTACCGC GGTCCGCATC ACCGATGACA CGGGCGCCGA GGTCGAGGGA GAGCCGCGGG AGGATGGCTC AACCTGGGTG CCGAGCGCGC CGTTGAAGCC AAAACGGACG TATACCGCCG AGGTGACTGC TACCGGTGAC TCCGGTAAAA CCACTACCAC CCGGAAAACA ACCTTCACCA CCAGGCCGAA GTCCACCAAA CCGGCAATTA CCAGCACGTT GTATTTCACG GGTGACCGGA CGTATGGAAC CGCGATGCCA GTGACCGTCG CGTTCGACCC ACCGATTCCG GAGGAGGCCC GGGCCGCCGT TCAGCGGCGT CTGTTCGTGC GGACTAACCC GTCCCAGCCC GGGGTGTGGT CCTGGGTGTC TGACGGCAGC CAGGTCTACT ACCGGGCGCC GGACTTCTGG CGACCGGGTA CGACGATCAG CTTCCGCGCC GGTTTGGAGG GCCTGCCGAT CGGCGAGGAC TACGTGGGCG ACGCCGACCG ACGGGCAACC TCGAAGATCG GCCGTCAGGT CGCCTTGGAG ATCGACAACG ACACCAAGCA GATGTCGGTG TTCCAGGACG GAAAGCTGCT GCGGGAGCTA CCGGTGAGCC TCGGAAAGCC GAGCACGCCG ACCTCCAGCG GCAAGATGGT GATCATGGAA AAGCATCAGT TCACCACCTT CGACACCCGT GGCTCAGCGG ACCCGTACGT GGTGGATGTC GAGGATGCAC AGCGGTTGAC CTGGCGGGGT GAGTTCCTCC ACGGCGCGCC CTGGTCGGAG GGAGTTCAGG GGTACCGCAA TGTCTCCCAC GGCTGTACCA ACCTCGCCGC CGCCGCTGCC GACTGGCTGA TGGGCATCAC CGAGGTCGGC GATCTGGTGA CCATCAAGGG CACCGAGGTG ACCTTGGACG AGGGCAACGG CTGGACCGCC TGGAATGAGA GCTGGGAGGA GTACGTCAAG GGCAGTGCCC TGCCCGTGCC GGCCGGCCTG AAACCGAGTC CGGCTGCGCC GAACCCGGGT GCGGTGGCCG GCGGCTCCCC TGCACCGGTG CCGTCCGAGG GCAGCGGCTC TCCCGCGCCG GAGCCCTCCG TGAGCGGCGG CTGA
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Protein sequence | MKFRRRMTLL AVTVAAVPVA LGGCTIGGRE EARPAPPELT VTPTDQTSDV PISAEVGTTV KGGTITAVRI TDDTGAEVEG EPREDGSTWV PSAPLKPKRT YTAEVTATGD SGKTTTTRKT TFTTRPKSTK PAITSTLYFT GDRTYGTAMP VTVAFDPPIP EEARAAVQRR LFVRTNPSQP GVWSWVSDGS QVYYRAPDFW RPGTTISFRA GLEGLPIGED YVGDADRRAT SKIGRQVALE IDNDTKQMSV FQDGKLLREL PVSLGKPSTP TSSGKMVIME KHQFTTFDTR GSADPYVVDV EDAQRLTWRG EFLHGAPWSE GVQGYRNVSH GCTNLAAAAA DWLMGITEVG DLVTIKGTEV TLDEGNGWTA WNESWEEYVK GSALPVPAGL KPSPAAPNPG AVAGGSPAPV PSEGSGSPAP EPSVSGG
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