Gene Strop_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2100 
Symbol 
ID5058563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2374325 
End bp2375608 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID640474363 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001158929 
Protein GI145594632 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0449665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.352624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA GGCGGCGAAT GACGCTGCTC GCGGTAACTG TCGCGGCCGT ACCGGTAGCG 
CTCGGAGGGT GCACCATCGG CGGGCGCGAG GAGGCCCGAC CGGCACCGCC GGAACTAACC
GTGACGCCGA CCGACCAGAC CTCGGACGTT CCGATCAGCG CCGAGGTCGG CACCACGGTC
AAGGGCGGGA CGATTACCGC GGTCCGCATC ACCGATGACA CGGGCGCCGA GGTCGAGGGA
GAGCCGCGGG AGGATGGCTC AACCTGGGTG CCGAGCGCGC CGTTGAAGCC AAAACGGACG
TATACCGCCG AGGTGACTGC TACCGGTGAC TCCGGTAAAA CCACTACCAC CCGGAAAACA
ACCTTCACCA CCAGGCCGAA GTCCACCAAA CCGGCAATTA CCAGCACGTT GTATTTCACG
GGTGACCGGA CGTATGGAAC CGCGATGCCA GTGACCGTCG CGTTCGACCC ACCGATTCCG
GAGGAGGCCC GGGCCGCCGT TCAGCGGCGT CTGTTCGTGC GGACTAACCC GTCCCAGCCC
GGGGTGTGGT CCTGGGTGTC TGACGGCAGC CAGGTCTACT ACCGGGCGCC GGACTTCTGG
CGACCGGGTA CGACGATCAG CTTCCGCGCC GGTTTGGAGG GCCTGCCGAT CGGCGAGGAC
TACGTGGGCG ACGCCGACCG ACGGGCAACC TCGAAGATCG GCCGTCAGGT CGCCTTGGAG
ATCGACAACG ACACCAAGCA GATGTCGGTG TTCCAGGACG GAAAGCTGCT GCGGGAGCTA
CCGGTGAGCC TCGGAAAGCC GAGCACGCCG ACCTCCAGCG GCAAGATGGT GATCATGGAA
AAGCATCAGT TCACCACCTT CGACACCCGT GGCTCAGCGG ACCCGTACGT GGTGGATGTC
GAGGATGCAC AGCGGTTGAC CTGGCGGGGT GAGTTCCTCC ACGGCGCGCC CTGGTCGGAG
GGAGTTCAGG GGTACCGCAA TGTCTCCCAC GGCTGTACCA ACCTCGCCGC CGCCGCTGCC
GACTGGCTGA TGGGCATCAC CGAGGTCGGC GATCTGGTGA CCATCAAGGG CACCGAGGTG
ACCTTGGACG AGGGCAACGG CTGGACCGCC TGGAATGAGA GCTGGGAGGA GTACGTCAAG
GGCAGTGCCC TGCCCGTGCC GGCCGGCCTG AAACCGAGTC CGGCTGCGCC GAACCCGGGT
GCGGTGGCCG GCGGCTCCCC TGCACCGGTG CCGTCCGAGG GCAGCGGCTC TCCCGCGCCG
GAGCCCTCCG TGAGCGGCGG CTGA
 
Protein sequence
MKFRRRMTLL AVTVAAVPVA LGGCTIGGRE EARPAPPELT VTPTDQTSDV PISAEVGTTV 
KGGTITAVRI TDDTGAEVEG EPREDGSTWV PSAPLKPKRT YTAEVTATGD SGKTTTTRKT
TFTTRPKSTK PAITSTLYFT GDRTYGTAMP VTVAFDPPIP EEARAAVQRR LFVRTNPSQP
GVWSWVSDGS QVYYRAPDFW RPGTTISFRA GLEGLPIGED YVGDADRRAT SKIGRQVALE
IDNDTKQMSV FQDGKLLREL PVSLGKPSTP TSSGKMVIME KHQFTTFDTR GSADPYVVDV
EDAQRLTWRG EFLHGAPWSE GVQGYRNVSH GCTNLAAAAA DWLMGITEVG DLVTIKGTEV
TLDEGNGWTA WNESWEEYVK GSALPVPAGL KPSPAAPNPG AVAGGSPAPV PSEGSGSPAP
EPSVSGG