| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2096 |
|---|
| Symbol | |
|---|
| ID | 5058559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2369975 |
|---|
| End bp | 2370520 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640474359 |
|---|
| Product | AsnC/Lrp family regulatory protein |
|---|
| Protein accession | YP_001158925 |
|---|
| Protein GI | 145594628 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.166489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.228251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG AGTCCGGCCC AGGTGGGGCC TCGACGACCG GGCCGGGACG ATCGGCCCGG
CCGCTGGACG ATGTGGACCG CCGCATCCTG GCCGAGCTGG TCCGCGACGG ACGCACGTCG
GTACGGACGC TCGCCGCACG TCTGCACATC TCCCGAACCA ACGCGTACGC CCGGGTGGAG
CGGCTACTAC GAGACGGTGT GGTCACCGGC TTCCAGGCCC GGGTGGCGCC GGAGGCCGCC
GGGTTGGGCA CTTCGGCGTA CATCGCGATC ACCATCGAAC AGAACACCTG GCGGGAGGTC
TCGGCGGAGC TGGCCCAGGT GCGCTACCTG GAGCACGCCG CGCTGGTTGG CGGCGACCAC
GACGTCCTCG CTCTGGTCCG GGCCCCGGAC AACGCCACGC TGCGAGATGT GGTGCTGACC
CGGGTGCAGA GCATCCCCGG GGTGCTCTCC ACCCGCACCT GGCTGGTCTT CCACGAGTTC
GACGGCGCGA CGTCACCCTG GGGCCCGGCC GCGTCCCCTC CGCTTCCCGG CCCCGGGGGG
CCCTGA
|
|---|
| Protein sequence | MSQESGPGGA STTGPGRSAR PLDDVDRRIL AELVRDGRTS VRTLAARLHI SRTNAYARVE
RLLRDGVVTG FQARVAPEAA GLGTSAYIAI TIEQNTWREV SAELAQVRYL EHAALVGGDH
DVLALVRAPD NATLRDVVLT RVQSIPGVLS TRTWLVFHEF DGATSPWGPA ASPPLPGPGG
P
|
|---|
| |