| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2068 |
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| Symbol | |
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| ID | 5058531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2340071 |
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| End bp | 2341561 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474331 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001158897 |
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| Protein GI | 145594600 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.695646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.718016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTGGC GGGACGGGGG CAAGCTGTAC ACACAGCACG TCCGACGCCT CGCCCCGCAC
GCGGCCTCCT CCGGCCGGGC GGCGCTCCTG CTGGCCTGCA CCGCGCAGTT CCTGGTGGTG
CTCGACGTAT CAGTGGTCAA CATCGCACTT CCGTCCATCC AACGGACCCT CTCCCTGTCA
CCGTCCGGCC TGCTGTGGGT GACCAACGCC TACGCGTTGG TGTTCGGAGG CTTTCTCTTG
TTGGGCGGCC GACTATCCGA TGTGTATGGA CGCAAGCTGG TCTTCATCGC CGGACTGGGG
CTGTTCACCG CCGCGAGTCT CGTCGGCGGG ATCGCCTCCA CCGCCGGCGT GCTGGTCGGT
GCCCGCGCGT TCCAGGGCCT CGGTGCCGCC GCGCTGGCAC CCGCCACCCT GACGATCCTC
ACCACGACGT TTCCGCATGG GCCCGCCCGT AACCGTGCGT TGGCGGTCTG GACCGCGGTC
AGCCTGGCCG GCGGCGCGGT CGGCAACCTT GTCAGCGGTG CCCTCACCGA GTACCTGACC
TGGCGGTCAA CCCTGCTGAT CAACGTACCG ATCGGCATGT TCTGCATTGT CGTAACAGCT
GCCGCGCTGG CCGAAGGGAG GCCACGTGAC CGGGTCGTCC GTCTCGACGT CACGGGTGCC
GCCCTGGTCA CCACCGCCCT GATCGCGGTG ACCTACGCCG TCACGGCCAG CTACTCACAC
GGCCGACGAG ATCCGACCGC CGTAGCGGCG TTGGTAGCCG GCCTGGTCTG CCTGGCCGCC
TTCGTCGTGG TCGAGGCACG CGGCGCCGAA CCGCGGCTCC TGCCGCTGCG GCTGCTGCGA
ACCAGGGCGA TCTGGCTGGG CAACCTGCTG ATGCTGTTGG TCGGGGCAGG CTTCCAGATC
CCGCTGTGGT ACTTCCTGAC CCTGTACCTG CAGCAGGTAC TCGAACTCAC CCCGCTACAG
ACCGGGGCCG GGTTCGTGCC ACACACCCTG CTGATGATGC TGGTCGGAAT GCGCGTGGCC
CCATGGCTGA TGCGGCACGT CCCCGCCCGG ACCCTGGTCA TCGTCGGAAC CGCCATCGCC
GCGGCAGGTT TCTGGTGGCA GAGCCAGATC ACCGTCCACA GCACCTATCT GTCCGGCGTA
CTCGGCCCCG CCGTCGTCAT CTCGATCGGC GGCGGGCTAC TCATCGTGCC GCTGACCGCG
GTGGTGACCT CTGGTGTCTC CGGCCCCGAT GCCGGGGCAG TCTCTGGGCT GACGAACACC
GCCAAACAGT TTGGTGGCGC CCTTGGTCTG ACCGCCTTAG TCGCATTGAC CAGCCGGCAT
TCGTCAGCCA AGACCGATCT CGTCAGCGGC TACGCGCAGG CGTTCGCGTT CACCGCCCTC
ATCCTGACCC TCGTCGCCGT CGTGGCGTTC GCACTACCGG CCCAGGATTC CGCTAGGCCA
GTTCCCGGGT CTCGCCGGAC CAACGCCGGC GCAACCGGCG GTCATGACTG A
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| Protein sequence | MGWRDGGKLY TQHVRRLAPH AASSGRAALL LACTAQFLVV LDVSVVNIAL PSIQRTLSLS
PSGLLWVTNA YALVFGGFLL LGGRLSDVYG RKLVFIAGLG LFTAASLVGG IASTAGVLVG
ARAFQGLGAA ALAPATLTIL TTTFPHGPAR NRALAVWTAV SLAGGAVGNL VSGALTEYLT
WRSTLLINVP IGMFCIVVTA AALAEGRPRD RVVRLDVTGA ALVTTALIAV TYAVTASYSH
GRRDPTAVAA LVAGLVCLAA FVVVEARGAE PRLLPLRLLR TRAIWLGNLL MLLVGAGFQI
PLWYFLTLYL QQVLELTPLQ TGAGFVPHTL LMMLVGMRVA PWLMRHVPAR TLVIVGTAIA
AAGFWWQSQI TVHSTYLSGV LGPAVVISIG GGLLIVPLTA VVTSGVSGPD AGAVSGLTNT
AKQFGGALGL TALVALTSRH SSAKTDLVSG YAQAFAFTAL ILTLVAVVAF ALPAQDSARP
VPGSRRTNAG ATGGHD
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