| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2058 |
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| Symbol | |
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| ID | 5058521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2331322 |
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| End bp | 2333214 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474323 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001158889 |
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| Protein GI | 145594592 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.366352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGA CCGAGATTGA CCCCCACATT CAGATCCTCG GTCCCGTCCA AGCGACGATC
CGCGGTAGAG AGATCGACCT AGGACCCCCG AAACAGCGAG CAATTCTCGC CCTTTTGGCG
TTACGGGCAG GACGACACGT GCCACTCGAT GATGTGGTCG CCGCGCTCTG GACGGGACAG
TCACCGACCC GCGCCGCCAA CCTTGTGCAC ACCTACGTCG CCCGACTGCG CCATGTGCTG
GAGCCGGACA CACCACGCCA TCAACGAACA AACGTTATCG GCTCCGTATC CGGCGGGTAC
CGGCTGGCTG TCGGTGTGAG GCAGCTCGAC CTGCACGCAT TTCGTGCCGA AGTCCGGGAG
GCCACGGACC TTCACGAGCG CGGCGAGCCG ACTGGCGCCT TCGCCCGCTT CGCCGAGAGC
ATTGGCCGGT GGCGAGATCC CCAGGTCAGC GATCTGGCCG CTCTCCTGAT CGAGCAGGAC
GACATTCGCC CGCTGCGGCA AGAGTTCCTG GCCGCAGCGC TCAGCTATGT CGGCCTCGGT
CTGGAGCTGG GCCGGCCGGA GGCAGTCCTG CCGGTTGCCG AGCGACTGGC GCTGACGGAG
CCACTCAACG AGCGGGTGCA GGCCCGGCTG TTGCAGACGC TGGCCCGAAT CGGCCAGCGG
GCTCGGGCCA TTGAGCGGTA CGCCGAGGTA CGCGGGCGGC TTCGGCGTGA CCTCGGTGTA
GACCCGGGGC CCGACCTGTC TACGGCGTAC CGCGAGGTGT TGGACGCCAG GCTGACCTCG
TCGTACACCC ACCGAAAGGG CCCGGCTCAC GCCCCACCAT GGCGAGGGGC GGCACCCCTG
ATCGACGAGC TGACCGGGCG TACGGCCGAT CTTGCGGCAG TCAACGATCT GCTTGACGGA
TATCGCCTGG TAAGCCTCAC CGGTCCGGCC GGCGTAGGCA AGTCCGCGCT TGGCCTGACC
GTCGCCGAGC AGCAGCGGGA GCGGCACGCC GACGGGGTCG CGGTCGTCGA CCTGACGGAC
GTACGCACCG GGCTCGCTCT CGAACGGGCG GTGAACGCGG TGGTCGCCCC CCACCCGCCG
CGAACGACGG GACCACCAGT GCCCCTGGTA CGTCAGCTGG ATGGCCGGCG GCTGCTGCTC
GTGATCGACA ACGCCGAATT CGTCACCGAT GCGGCAGCCG ATTTGGCAGA CGAACTGCTC
CGCGGTTGTC CCGGCCTCAC CGTCCTGTTG ACCTCGCGCG AGTTGCTCGG GATGCGGTAC
GAGGCGGTGC ATCCGGTCCG GCCACTGCGC ACCGAGCCAG AGCCGGGGTC GTCGGCGCCT
CCACCCGCAC AACAACTGTT CACCCGACGG GCCATGCAGG TGCAGCCGAG CTTCCGACTC
GACGAGTCCA CCGTGGCAGG GGTCACCACG GTGTGCCGGG CCCTCGACGG CCTCCCCCTC
GCCATCGAGC TGGCCGCAGC GTCGCTGCGG ACGCAACGGT TGGAATCCCT GGTTGAGGTC
GTTGCCAATC CGCTGCATTG GCTCCGGCCG CCGCGGCGTG GGGTGCCGAG TCACCATCGG
TCGCTACACG CTGCCGTGCA TCGCAGTATC GAATTGCTCG ACGCGGCGGA GCTGCGCTGC
TTCACCGGTC TCGGGGCGAT GCCCGCCGAC TTCGACCTGG CGGCCGCCGC CGGTGTCGGC
GAGGCGCTGA TCGGTGATCT CCGCGCCGTG CAGGTGCTGT TGGATCGACT GGTCGACAAA
TCGGTGTTGG AAGTTCGGCA CGGTCCCGCC GGCCGGACTT ACCACATGCT CAGCACGGTT
CATGCATTGG CCCGACAGCT CTTTCAGGAG GGTGTTTGCA CAGCAGCACC CTCCTCGGCC
CGGTGCACAT GCGGCTGCCA CCCCGGTGAT TGA
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| Protein sequence | MSRTEIDPHI QILGPVQATI RGREIDLGPP KQRAILALLA LRAGRHVPLD DVVAALWTGQ
SPTRAANLVH TYVARLRHVL EPDTPRHQRT NVIGSVSGGY RLAVGVRQLD LHAFRAEVRE
ATDLHERGEP TGAFARFAES IGRWRDPQVS DLAALLIEQD DIRPLRQEFL AAALSYVGLG
LELGRPEAVL PVAERLALTE PLNERVQARL LQTLARIGQR ARAIERYAEV RGRLRRDLGV
DPGPDLSTAY REVLDARLTS SYTHRKGPAH APPWRGAAPL IDELTGRTAD LAAVNDLLDG
YRLVSLTGPA GVGKSALGLT VAEQQRERHA DGVAVVDLTD VRTGLALERA VNAVVAPHPP
RTTGPPVPLV RQLDGRRLLL VIDNAEFVTD AAADLADELL RGCPGLTVLL TSRELLGMRY
EAVHPVRPLR TEPEPGSSAP PPAQQLFTRR AMQVQPSFRL DESTVAGVTT VCRALDGLPL
AIELAAASLR TQRLESLVEV VANPLHWLRP PRRGVPSHHR SLHAAVHRSI ELLDAAELRC
FTGLGAMPAD FDLAAAAGVG EALIGDLRAV QVLLDRLVDK SVLEVRHGPA GRTYHMLSTV
HALARQLFQE GVCTAAPSSA RCTCGCHPGD
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