| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2052 |
|---|
| Symbol | |
|---|
| ID | 5058515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2322850 |
|---|
| End bp | 2324325 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640474317 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_001158883 |
|---|
| Protein GI | 145594586 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTACGA AGTGGTTGAG TGGAGCGCTG GCCGTGGTGG TGGCGGGTGC GGTGGTTGGT
GCGGTGCCGC GGGTGGCGGG GGCGATGACC TCGGTCGCGC CTGCGCCGGT TGTTGCGGCG
GCGCCTAACC ACGCCATTGA GCAGGTGCGG GAGCAGTTCC TGCGGCACGG TCCGGGTGCT
GGGGTGCTGG TGGTGGCGCA CCGTGGTCAC TGGCGGGCTG CGCCGGAGCT TTCGCTGGCG
GCGATCGACT CGGCGGTGGA GTCGGGCGCG CATGTGGTGG AGATCGATGT GCGGCGTACG
GCTGATGGGC ATCTGGTGTT GATGCATGAC GGCACGGTGG ATCGGACGAC GGACGGTAGC
GGTGCGGTGT CGGAGTTGAC GTTGGCCGAG GTGAAGCAGT TGCGGTTGAA GGTGGGCCTG
GGTGGTGATC AGGCGCCGTT GACCGATGCG CGGGTGCCGA CGTTGGCGGA GGCGATGGCG
GTGGTGCGGG GTCGTGCCAT GGTCAACCTG GACAAGGCGT GGGAGATTCG GGACGAGGTG
TACGACGTCC TGGTCGAGAC GGACACGCTT GATCACGGGA TCTTCAAGGG GCCGGCGACG
CTGGCGGACG CCCAGGAGTT TCTCAACTTC GACCCGGAGA TTCTCTACAT GCACAAGATC
AACGACGACA ACGTGGACGA GATCGGCGCG TTCACCGGTC GTGCTCCGCA GGCGTACGAG
ATCGGTTTTG ACCGGCTCAC GGATCCGCAG GTGCAGCCGG CGGCGTTGGC AGCAGTTCAG
TCGCACGCCC GGGTGTGGAT GAACACGTTG TGGTACGGCC AGGCCGCTGG CTACACCGAT
GAGACGTCGT TGCGGGATCC GGCGCTGGGG TGGGGTGCGG TGGTGGATCG GCACCAGGCG
GACATGATCC AGACCGACAA CCCGGAGCAG CTGGTGAGCT GGTTGGCGAG TCGGGACAAC
AAGCACGGCG GTCGGGGGGA GTGGCCGTCG TTGCCGAAGG GTTCGGTGCG GGTGCAGGCC
GAGGACTACT CGCTGGAGGG TAAGGGGATC GGTTACCACG ACCTGGATGA CGAGAACCGG
GGTGGCACGG TGGCCCGTGA GTACGAGGGT GTGGACATCT GCGACCAGTC CGGCGCGGTG
GTGATGTGTT GGATTCGTGG CGGCGAGTGG GTGAAGTACA CCGTTGAGGT GCCGAAGTCG
GGTCACTACC GGGCGAGCGT GCGGATGTCG TCGCCGTACT TCCCGGCGGG TCGGTTCACG
ATGACCGTCG ACGGCCGGTC GACGACGGGT CCGGTGGATG TGGTCGGCAC GACCTCACAC
AGTGCCTTCG TGTTGCAGGA GATCGAGGGG ACCCAGTTCC TGCGTCGGGG TACGCACGAG
TTCGAGGTGC GGATGGACGA CGCGGCGTAC CAGAACTTCA ACATCGACTA CTTCCAGTTC
GACCGCGTCC AGCACGGAGA CCCGCTGAAC CGCTGA
|
|---|
| Protein sequence | MRTKWLSGAL AVVVAGAVVG AVPRVAGAMT SVAPAPVVAA APNHAIEQVR EQFLRHGPGA
GVLVVAHRGH WRAAPELSLA AIDSAVESGA HVVEIDVRRT ADGHLVLMHD GTVDRTTDGS
GAVSELTLAE VKQLRLKVGL GGDQAPLTDA RVPTLAEAMA VVRGRAMVNL DKAWEIRDEV
YDVLVETDTL DHGIFKGPAT LADAQEFLNF DPEILYMHKI NDDNVDEIGA FTGRAPQAYE
IGFDRLTDPQ VQPAALAAVQ SHARVWMNTL WYGQAAGYTD ETSLRDPALG WGAVVDRHQA
DMIQTDNPEQ LVSWLASRDN KHGGRGEWPS LPKGSVRVQA EDYSLEGKGI GYHDLDDENR
GGTVAREYEG VDICDQSGAV VMCWIRGGEW VKYTVEVPKS GHYRASVRMS SPYFPAGRFT
MTVDGRSTTG PVDVVGTTSH SAFVLQEIEG TQFLRRGTHE FEVRMDDAAY QNFNIDYFQF
DRVQHGDPLN R
|
|---|
| |