Gene Strop_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2042 
Symbol 
ID5058505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2314091 
End bp2314675 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID640474307 
Producthypothetical protein 
Protein accessionYP_001158873 
Protein GI145594576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.936652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TTCTGCGTCG TAGCGTCCTG GGTATCGCTG GTCTGGCCCT GTCCACCGGT 
GTCGTCGCCG GCCCCCTGAC CACCTACACC GACAGCACCC CGGCCTCGGC TTCGGCCGCG
GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCAAG
CAGTCACGCA TCACTCTCGG TGATGAGCAG ACCGGGAACG TGAAGGCCAT CATCGAGGCC
ACGAAGGCCG CCGGCATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGCTTGCAG
GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AGCGCCCCTC CTCCGGCTGG GGCACGGTCG AGCAGATCAC CGACCCCGCC
TACTCCACGA CCGCGTTCCT GGACGGGTTG AAGCAGGTTG AGGGTTGGCA GGAGATGCCG
TTGACCGAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAGACCCAGG CCGCCGACCT CGTGGCCGAA CACTGGACCA GCTGA
 
Protein sequence
MNTILRRSVL GIAGLALSTG VVAGPLTTYT DSTPASASAA AVQVAKPDLD TLIPHGTQGK 
QSRITLGDEQ TGNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPA YSTTAFLDGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS