Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2042 |
Symbol | |
ID | 5058505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2314091 |
End bp | 2314675 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474307 |
Product | hypothetical protein |
Protein accession | YP_001158873 |
Protein GI | 145594576 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.936652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACGA TTCTGCGTCG TAGCGTCCTG GGTATCGCTG GTCTGGCCCT GTCCACCGGT GTCGTCGCCG GCCCCCTGAC CACCTACACC GACAGCACCC CGGCCTCGGC TTCGGCCGCG GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCAAG CAGTCACGCA TCACTCTCGG TGATGAGCAG ACCGGGAACG TGAAGGCCAT CATCGAGGCC ACGAAGGCCG CCGGCATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGCTTGCAG GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC CTGTTCCAGC AGCGCCCCTC CTCCGGCTGG GGCACGGTCG AGCAGATCAC CGACCCCGCC TACTCCACGA CCGCGTTCCT GGACGGGTTG AAGCAGGTTG AGGGTTGGCA GGAGATGCCG TTGACCGAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG GAGACCCAGG CCGCCGACCT CGTGGCCGAA CACTGGACCA GCTGA
|
Protein sequence | MNTILRRSVL GIAGLALSTG VVAGPLTTYT DSTPASASAA AVQVAKPDLD TLIPHGTQGK QSRITLGDEQ TGNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG LFQQRPSSGW GTVEQITDPA YSTTAFLDGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW ETQAADLVAE HWTS
|
| |