Gene Strop_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2036 
Symbol 
ID5058499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2308939 
End bp2309877 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content63% 
IMG OID640474301 
ProductABC-3 protein 
Protein accessionYP_001158867 
Protein GI145594570 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.292587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.523327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCA CTGATTTCCT CACCGACCTG TTCAACCCCA ACCTTGCGTT CCTGCCGAAG 
GCCTTGGCGA TCGCGGTCAT GTCAAGCATT GTCTGCGGTG TCGTGGGCTG CTATGTGGTC
CTGCGGGGCA TGGCCTTCAT CGGCGACGCC GTGGCCCACG CGGTCTTCCC GGGAATCGCG
GTCGCCTTCG TCCTGCAGGG CAGTCTGGTC CTGGGCGGAG CGGTCGCCGG GGTCGCCACC
GCACTGCTGA TCGCGATCTT TTCGCAGAAT CGACGCGTCA AGGAAGACTC GATCATCGGT
GTCTTCCTGG TTGGCGCGTT CGCCCTCGGC ATTGTGATCA TCTCACAGGC TCCGGGGTAC
GCCGGATCCC TGCAACAGTT CCTGTTTGGC TCGATCACCG GCATTGCCGA CCGGGACCTC
TACGTCGTCG GTGGTGCCGG CCTGGTCATT CTCGGCCTGG TACTCGCTCT GCACAAGGAA
TTCGTCGCAG TCTGCCTCGA CCGCGAGATG TCGCGCTCGA TGGGGCTTTC GGTCTTCTGG
CTCGACATCG TGCTCTACGT TTTGGTCACC CTCGCCGTGG TGATCTCTCT GCAGACGATC
GGAACCATCC TCGTCCTCGC TTTGTTGATC ACCCCTGCGG CGGCGGCTCG TCTACTCACC
GACCGACTCG GCGTGATGAT GCTGCTCGCC CCGGTGATCG GCGGCTCGGC AGCGGTCGTT
GGCCTGTATC TGTCCTGGAG CTACGACACG CCGGTTGGTG GCACGATCGT TCTGATTGCC
ACGGCCGTCT TCCTCGCTGC CTGGTTGCTT GCCCCTCGAC ACGGCCTCTT GACCAAGCGA
TGGCGGCGGG TGAGTGGGAA GGATCTCGCT GGTAGTGCCC GCCCTTCGTC GCTGTCCAAC
CCCAGTTCTC GCCAGGAGCC ATCACCGGCT TCGCGGTAG
 
Protein sequence
MSITDFLTDL FNPNLAFLPK ALAIAVMSSI VCGVVGCYVV LRGMAFIGDA VAHAVFPGIA 
VAFVLQGSLV LGGAVAGVAT ALLIAIFSQN RRVKEDSIIG VFLVGAFALG IVIISQAPGY
AGSLQQFLFG SITGIADRDL YVVGGAGLVI LGLVLALHKE FVAVCLDREM SRSMGLSVFW
LDIVLYVLVT LAVVISLQTI GTILVLALLI TPAAAARLLT DRLGVMMLLA PVIGGSAAVV
GLYLSWSYDT PVGGTIVLIA TAVFLAAWLL APRHGLLTKR WRRVSGKDLA GSARPSSLSN
PSSRQEPSPA SR