Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2035 |
Symbol | |
ID | 5058498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2308196 |
End bp | 2308939 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474300 |
Product | ABC transporter related |
Protein accession | YP_001158866 |
Protein GI | 145594569 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.470588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.523327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCGAGC TCGAGGTTGA TCAGCTGGAC GTGGACCTTG GTGGTCGACC GGTCCTGCGG GACATCCACC TGCGCCTGGA CCGGGGTGAG CTGGTCGGCC TCCTCGGTCC GAACGGTGCC GGTAAGACCA CCCTGCTCCG CGCGATCTTG GCGCTGACCG CTGTCCGCGC CGGCCGGGTG CTGGTGGGGG GCAAGCCGTC GCGTCCCGGC CGCTGCGAGA TCGGCTACGT CCCCCAGCGC CACGAGTTCA CCTGGGACTT TCCCATCTCT GTCGAGCAGG CCGTGATGAG TGGCCGGACC GGCCGCATGG GGCTGTTCCG CCGCCCTGGC GTCGCCGACT GGCGGGCCGT CGGTGACGCT CTGGACCGGG TACAGCTCAC TGAGCTGCGT CGCCGACCGG TCGGCGAGTT GTCTGGTGGG CAACGCCAAC GCGTCCTGGT CGCTCGCGCT CTCGCGCTCG CGCCGCGGGT CCTCCTGCTC GATGAGCCGT TTACCGGGCT GGACATGCCC ACCCAGGAAC TACTGGGTGA CTTGTTCACG AGTCTGGCCG GTGAGGAGCA CGCGGTACTG ATGACCACCC ATGACCTCGT AGCCGCGGTG GACACCTGTA GCCGCCTGGT CCTGCTCAAC GGTCGGATCA TCGCCGACGG ACACCCGGCG GACCTGCAAG ACGCCGCGCT GTGGACGACG ACTTTCGGCG TGAGTGACAC CTCCCCGCTA CTGAAGCTCG TGAAGGCGAT CTGA
|
Protein sequence | MSELEVDQLD VDLGGRPVLR DIHLRLDRGE LVGLLGPNGA GKTTLLRAIL ALTAVRAGRV LVGGKPSRPG RCEIGYVPQR HEFTWDFPIS VEQAVMSGRT GRMGLFRRPG VADWRAVGDA LDRVQLTELR RRPVGELSGG QRQRVLVARA LALAPRVLLL DEPFTGLDMP TQELLGDLFT SLAGEEHAVL MTTHDLVAAV DTCSRLVLLN GRIIADGHPA DLQDAALWTT TFGVSDTSPL LKLVKAI
|
| |