Gene Strop_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2035 
Symbol 
ID5058498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2308196 
End bp2308939 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID640474300 
ProductABC transporter related 
Protein accessionYP_001158866 
Protein GI145594569 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.470588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.523327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGAGC TCGAGGTTGA TCAGCTGGAC GTGGACCTTG GTGGTCGACC GGTCCTGCGG 
GACATCCACC TGCGCCTGGA CCGGGGTGAG CTGGTCGGCC TCCTCGGTCC GAACGGTGCC
GGTAAGACCA CCCTGCTCCG CGCGATCTTG GCGCTGACCG CTGTCCGCGC CGGCCGGGTG
CTGGTGGGGG GCAAGCCGTC GCGTCCCGGC CGCTGCGAGA TCGGCTACGT CCCCCAGCGC
CACGAGTTCA CCTGGGACTT TCCCATCTCT GTCGAGCAGG CCGTGATGAG TGGCCGGACC
GGCCGCATGG GGCTGTTCCG CCGCCCTGGC GTCGCCGACT GGCGGGCCGT CGGTGACGCT
CTGGACCGGG TACAGCTCAC TGAGCTGCGT CGCCGACCGG TCGGCGAGTT GTCTGGTGGG
CAACGCCAAC GCGTCCTGGT CGCTCGCGCT CTCGCGCTCG CGCCGCGGGT CCTCCTGCTC
GATGAGCCGT TTACCGGGCT GGACATGCCC ACCCAGGAAC TACTGGGTGA CTTGTTCACG
AGTCTGGCCG GTGAGGAGCA CGCGGTACTG ATGACCACCC ATGACCTCGT AGCCGCGGTG
GACACCTGTA GCCGCCTGGT CCTGCTCAAC GGTCGGATCA TCGCCGACGG ACACCCGGCG
GACCTGCAAG ACGCCGCGCT GTGGACGACG ACTTTCGGCG TGAGTGACAC CTCCCCGCTA
CTGAAGCTCG TGAAGGCGAT CTGA
 
Protein sequence
MSELEVDQLD VDLGGRPVLR DIHLRLDRGE LVGLLGPNGA GKTTLLRAIL ALTAVRAGRV 
LVGGKPSRPG RCEIGYVPQR HEFTWDFPIS VEQAVMSGRT GRMGLFRRPG VADWRAVGDA
LDRVQLTELR RRPVGELSGG QRQRVLVARA LALAPRVLLL DEPFTGLDMP TQELLGDLFT
SLAGEEHAVL MTTHDLVAAV DTCSRLVLLN GRIIADGHPA DLQDAALWTT TFGVSDTSPL
LKLVKAI