Gene Strop_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2030 
Symbol 
ID5058493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2301279 
End bp2302739 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content69% 
IMG OID640474295 
Producthypothetical protein 
Protein accessionYP_001158861 
Protein GI145594564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.178771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCTC GCGGCTTCGC GGCCCTACTA ACCGGGGTGA TGGTGATCTT CGGTACGGTG 
CTGGCACCCA CTGCTGCGTC AGCGGCAGAA AGGACGGTGT TGTCCAAAGG ACACGCCGAT
GCGATCGACG TGCGTTACAG CGACGGCGAG CTGTCGTTGA AGGTCAACGA CGACACGGTC
AGCCCGGCCG TGGTCAGGGA TCCAGCGGAC GTCACGTTCC AGGTCCTGCC GGAGGCGGCG
ATGGCCGTTC CGGACGATTC CCGGTTCGCC TTCCTCGGAC CGGCGGGTAG CCAGATCTGG
CTGCTGCCGA TGACCCAGGA CCCGGACCTG CTCTGGCCGG GTTGGAACAC CACGACGCTC
GAGTCCGATG TGTTCGAGGG GGACACGGTT CGACTGAGCC TGGTCGAGGC GCAGGGGCCG
GGCAACGTCA CGCTGTTCAC GCAGGATTCG TTCGGCGGTC CGATCATCAA ATTCCGCGGG
GACGACGGGC TCCCGGACGC GATCGACGTG CCGGTGCACA CCCATGCGCA CTCGAACTGG
GCGTTCAGCG CGTTGGGTGA CTACACGCTG ACGTTCCAGG CCGACGCGAG GCTGACCGAC
GGCACCACGA TCAGCACCGG GCCGGTGGAC TATTCGTTCC TCGTCGGCGA ACTGCCCGGT
AACGGCTCGG AGGTCAGCCT GTCGATCAGC GGCATGGCCG ACGAGTACCA GCCCAACGAC
ACCGTCACGC TCACCGCCGT GCAGACGCCG CAGACCGAGC TGGATTCGTA CCACTGGTTC
AGCAAGTGCC CGGGTGCGTC TGACTGGACG ATTATCACGG GCGAAGCGGG TGCCAGCTAC
TCGTTCACCG CGACCCGGGA GCTGAACGCC TGCGAGTACG TGGCCAAGCT CTACGACGAC
GATGACGTGG TTTCCGCTGT CAGCGAGGCG GTGATTCTCT GGGTGGCGTT CGCGCCCGCG
GAGCCAGGGA GCTCGCAGAC GATCACCGCG TCGATCGACG AGACACAGGG CTCCCTGGTC
ATCAGCGTCG ACCCGGACGA CCGGGCCGTG GTGCTGCCAC CCGCCCAGCT CAACAGCGCC
GGTGACCGGT GGGAGAGCAG CGGTGAGCTT CGGCCGGTCA CGGTGACCGA CACCCGCGCC
GGTCAGCCGG GCTGGAGCGC GTCCGGGCAG ATCCCGGATG ACTTCGCCGG GCCCGACGAC
GCCACCTTCA GCGCCGGCTA CCTCGGCTGG ACCCCCCGGG TCCTGGCCCA GGGCGCCGGG
CAGGGGGTCA TCGCCGGTCC CGAGGTGGCA CCGTACGTCG TCGGCAGCGG CGGCGGCCTC
GGCAGCAGCG CGGTTCTGGG TTCGGCGCCG AACGACGCCG GGCGGGGCAC CGCCCAGCTG
GGTGCCGGGC TGCGGCTCAG CCTGCCCACC GAGACGGCCG CGGGAACCTA CACCGCGACC
CTCACCCTTA CCGCGATCTA A
 
Protein sequence
MRARGFAALL TGVMVIFGTV LAPTAASAAE RTVLSKGHAD AIDVRYSDGE LSLKVNDDTV 
SPAVVRDPAD VTFQVLPEAA MAVPDDSRFA FLGPAGSQIW LLPMTQDPDL LWPGWNTTTL
ESDVFEGDTV RLSLVEAQGP GNVTLFTQDS FGGPIIKFRG DDGLPDAIDV PVHTHAHSNW
AFSALGDYTL TFQADARLTD GTTISTGPVD YSFLVGELPG NGSEVSLSIS GMADEYQPND
TVTLTAVQTP QTELDSYHWF SKCPGASDWT IITGEAGASY SFTATRELNA CEYVAKLYDD
DDVVSAVSEA VILWVAFAPA EPGSSQTITA SIDETQGSLV ISVDPDDRAV VLPPAQLNSA
GDRWESSGEL RPVTVTDTRA GQPGWSASGQ IPDDFAGPDD ATFSAGYLGW TPRVLAQGAG
QGVIAGPEVA PYVVGSGGGL GSSAVLGSAP NDAGRGTAQL GAGLRLSLPT ETAAGTYTAT
LTLTAI