Gene Strop_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2022 
Symbol 
ID5058485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2293641 
End bp2294054 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID640474287 
Producthypothetical protein 
Protein accessionYP_001158853 
Protein GI145594556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.209451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.54181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGG AACGGGCGTG TCGGCAGGTG ACGACACGCC CGGAGTTGAT CACACTGGAC 
GCCGTGCCCG TACCCAGCAA ACGCGTCAAG GACGACCTCG CCGCCGACCT CGACCACCAC
GCCTCACAGG TCTGGCCCGG CCTGGAAGAA GTCACCATCC GCTGGCGCGG CAGCCACGGC
TACGTCACCG CCTGGACCAG TGAAGACGAC GGCGTACCCG TCTGCCGCCT CGAATACCTC
GGCTTCGACG ACGTCTACGG CTTCGCCCTC CACGACCCGG CCACCGACAC CTACACCCAC
AGCCTGCTCC CCGACGGACA CCCCGAAGGC AGCCCACAAG ACGCCCTCGA CTGCGCCATA
CGACTGCACC TGACCGGCAT CGCCGATCAG CCCCTCAACG ACGAAGACGA CTGA
 
Protein sequence
MPQERACRQV TTRPELITLD AVPVPSKRVK DDLAADLDHH ASQVWPGLEE VTIRWRGSHG 
YVTAWTSEDD GVPVCRLEYL GFDDVYGFAL HDPATDTYTH SLLPDGHPEG SPQDALDCAI
RLHLTGIADQ PLNDEDD