Gene Strop_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2019 
Symbol 
ID5058482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2290390 
End bp2291502 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content66% 
IMG OID640474284 
ProductATPase 
Protein accessionYP_001158850 
Protein GI145594553 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.10155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.253393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA TGCTGCGTGC CCCCGTTGAG GTCAAGTACG CCGATGAACT CGACTACCTG 
GCGTCGGTCG ACACCGATTC GAAGCCGTTT TCCTGGCGGC TCAGCCCACG TATGGTCCGG
CTATTCGTCC TCGGCTCCGA ACGCGCCGAC GGGCTGGACC GGGTGATCCC GCAGAAGTGG
TTCGGCGACC GCAGCTTCGT CGAGCGCAGC ATCGTCACCC TGGCCTCCGA CCGGGGTCTG
CTGCTTATCG GTGATCCCGG CACCGGCAAG AGCTGGCTGG CCGAGCTGCT GGCCGCGGCG
ATCTGCCGCA ACTCGACGCT GGTCGTGCAG GGTACCGCCG GCACCACGGA GGACCACGTC
AAGTACTCGT GGAACGTGTC CATGGTCATC GGCCGGGGGC AGTCCCGAGA GTCGATGATC
CCGTCACCGA TCATGACGGC GATGGAGCAG GGCGTCATCG GCCGCTTCGA GGAGCTGACC
CGCTCCACCA GCGACGTACA GGACGCGCTC ATCTCCATCC TGTCGGAGAA GTACGTCTCG
ATTCCCGAGC TGGACCATGA CAACATCGTC TTCGCCAAGC CGGGCTTTTC CATCATCGCG
ACCGCGAACA GCCGTGACCG CGGGGTCAAC GACCTGTCCT CGGCGTTGAA GCGACGGTTC
AACTTCGTCC GGATCCCGGT GGTGACCAAC AAACGTAGCG AGGCCGAGAT CGTCCGGTTT
CGCACCGAGG AGCTGCTGCG TCGGCACCGC ATCGAGGTGG AGGTTCCGCC CACCCTGCTG
GACATCTTGC TGCAGAGCTT CGCCGATCTA CGTACGGCTG CTGCGGGGGC GACCAGCGAC
GACGAGAAGC TCGAGTCGGC GCTGTCCACG GCGGAGCAGA TCGGCGTGCT GGAGGACGCC
ATCCTGCACA GCCAGTTCTT CGGCGACCGG GCGTTGCGTG CCGAAACCCT GGCCGGGTCG
CTGATGGGGT CGTTGGCCCG GCGAAGCCCG GAGGACCTGG CGATCCTCAA CAAGTACCTG
CACGGGGTGG TGGAGCCTCG GGCCAAGCAA GACGGCGGTG GGTGGGAGGA CTTCCTCGAC
GGCGGCCGCC AAGCGATTGC CGCTCTGTCG TGA
 
Protein sequence
MSEMLRAPVE VKYADELDYL ASVDTDSKPF SWRLSPRMVR LFVLGSERAD GLDRVIPQKW 
FGDRSFVERS IVTLASDRGL LLIGDPGTGK SWLAELLAAA ICRNSTLVVQ GTAGTTEDHV
KYSWNVSMVI GRGQSRESMI PSPIMTAMEQ GVIGRFEELT RSTSDVQDAL ISILSEKYVS
IPELDHDNIV FAKPGFSIIA TANSRDRGVN DLSSALKRRF NFVRIPVVTN KRSEAEIVRF
RTEELLRRHR IEVEVPPTLL DILLQSFADL RTAAAGATSD DEKLESALST AEQIGVLEDA
ILHSQFFGDR ALRAETLAGS LMGSLARRSP EDLAILNKYL HGVVEPRAKQ DGGGWEDFLD
GGRQAIAALS