| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2018 |
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| Symbol | |
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| ID | 5058481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2289032 |
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| End bp | 2290375 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474283 |
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| Product | VWA containing CoxE family protein |
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| Protein accession | YP_001158849 |
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| Protein GI | 145594552 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.531693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.264381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG ACCATCACGA TCGTGCCGAC GAGAATCGGC GGCAGGTGCT CTACTGGCGG
TTACTGGCCC GGCTCTTCGA CCCGACCGAG CAGCCTACGC TGGAAGCGGC GAGCCTGGCC
GTGGTCGAGG ACCTGGGGCT GCCCGCCGCG CTGCTGGACC CGGCCGTCTC GGTGGACACT
GTGGTCCAGC GCTACCCGTC GCTCGCCGCG GAGCTGCGCG GCCTGCTCAC CCCTGCCGAG
CACGCACCAG TGGCCGACGG CACCGCCACA CCGGAACCCG GCCCAGCCGA GGTGCGGCGG
GCCGCGCTGG TGTCGAAGGT GCTGCTCAAC GTGTTCGCCG CCGGCACCGG GCCGGTCAGC
GCCAGCGAGC TGGCCCGGTG GCAGTCCGAC GCCGGCTGGT TTGAGCAGGC GCTCGGTGCC
GAGCCGGGCG AGCTGCGCCG GCAGGGCGGG ACGGGGCTGG GTGGTGCTCT CGCCGCGCTG
GAGGGCGACC TGGTACGCCG GATGCATCTG CGCGAGGTGC TCGCCGACCC GGCGCTGGCC
AGCCGGCTCA CGCCGAGCAT GTCGCTGATC GAGCAGTTGT TGCGGGACAA GGCGAACCTG
TCCGGGGTAG CGCTGGCCAA CGCCAAGGCG CTGATCCGCC GGTTTGTCGA CGAGGTTGCC
GAGGTGCTGC GCACGCAGGT GGAGCAGACC AGCGTCGGAA CCATCGACAG GTCGGTGCCG
CCGAAGCGGG TGTTCCGTAA CCTCGACCTG GATCGCACCA TCTGGCAGAA CCTGACCAAC
TGGAGCCCCG AGGACCAGCG GCTCTACGTC GATCGCCTCT ACTACCGGCG TACGGCCCGC
CGTACGACAC CGGCTCGGCT GATCGTGGTG GTGGACCAGT CAGGCTCGAT GGTCGACTCG
ATGGTCAACT GTACGATCCT GGCGTCGATC TTCGCCGGGC TACCCAAGGT GGATGTGCAT
CTGATCGCGT ACGACACACA GGCGTTGGAC CTGACCCCGT GGGTGCGCGA CCCGTTCGAG
GTTCTGCTGC GCACCAAACT GGGTGGCGGC AACGACGGTC CGGTCGCCAT GGCGATGGCC
CGGCCCAAGA TCGCCGAACC GCGGAACACC GTCATGGTGT GGATTTCGGA CTTCTACGAG
TTCGACCGAT CGCAGCCCTT GTTCGACGGC ATCGAAGCCG TGCACCGTTC CGGCGTGCGA
TTCATCCCGG TCGGCTCAGT CAACAGCTCC GGGCAGCAGA GCGTCAATCC CTGGTTCCGG
CAACGCTTCA AGGACCTGGG CACCCCCGTG ATCTCGGGTC ACATCCGCAA ACTCGTCTTC
GAGCTCAAGA GCTTTCTCAC CTAG
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| Protein sequence | MTLDHHDRAD ENRRQVLYWR LLARLFDPTE QPTLEAASLA VVEDLGLPAA LLDPAVSVDT
VVQRYPSLAA ELRGLLTPAE HAPVADGTAT PEPGPAEVRR AALVSKVLLN VFAAGTGPVS
ASELARWQSD AGWFEQALGA EPGELRRQGG TGLGGALAAL EGDLVRRMHL REVLADPALA
SRLTPSMSLI EQLLRDKANL SGVALANAKA LIRRFVDEVA EVLRTQVEQT SVGTIDRSVP
PKRVFRNLDL DRTIWQNLTN WSPEDQRLYV DRLYYRRTAR RTTPARLIVV VDQSGSMVDS
MVNCTILASI FAGLPKVDVH LIAYDTQALD LTPWVRDPFE VLLRTKLGGG NDGPVAMAMA
RPKIAEPRNT VMVWISDFYE FDRSQPLFDG IEAVHRSGVR FIPVGSVNSS GQQSVNPWFR
QRFKDLGTPV ISGHIRKLVF ELKSFLT
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