| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2017 |
|---|
| Symbol | |
|---|
| ID | 5058480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2287626 |
|---|
| End bp | 2289035 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640474282 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158848 |
|---|
| Protein GI | 145594551 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.223815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.270417 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGAA CGCAGATCGC CGCCCTCACC GCTGGTCATC CGGCCGGGCT GACCGACGCC
CTCAACCTGG TGGCAGGCGT TGATGCCGCC CTGACCCGAG GCCTGGCCCG GGTCGGCGAG
GAGGACGCGA CGGCGCTGGC CGGCCTGGCC GGCGCGCTGG CGACCACCCC GTTGGCGAAC
CTGGTCGGCG AGGCGGTCGA CAAGATCATC GCTGGTTCGG GAACCCAGGA GTATGTCGCT
GCGCTTGCTG GAGCGCGGTC GGCGGTGCTC GGAGCGGTGC ACGATGCGCT GCTTGAGCAG
GTCGACGTCG CGTTGGGCCG CAGTCGCGCG CCGTGGGCGC CGGTCCCGGC CGCCGTACCC
GTCGAGGCGT CGCCGGCCCT GGCCGGGGTA CGCGCATGGT TGTCCGAGGT GGCGGTGACC
GGGTGGCGCG GCGTTGACCA CGAGTTGGTG GCCGGGGCCG GGACGGCGGT TGAGGCGGTG
CTGGCCGTGC CTGAACTGCG GCGGCTCGCG GTGCTGCTCG ACGGCCTCGC CGCTGAGCTG
CGGGCCTGCG TGCCGGTTGC CATGATGTCG CAGGTGCCAC AGCGCCGCTG GGCCGACCTA
TGGGCCCGTG GTGTGCTGCT CGCCCAGGAC ACCGCCGCCG GCGATGCTGC CCTCGGCGTC
GCCGAACGGG CTTCGGGGCG GCTGCTGCCG CTGGCGGTGG ACGTGCACGA ACACGACACC
GCGGTGCAGA TCCAGGTGCA CGCACTTCTC GAGCCGGCCG GCGGCGGGTC GCCCCGGCTG
GTCCGTACGG CGGTGGGCGC CGCGAAGGTG GACAGCATCG TCGGTCCGGC GCTGTGGCGG
CTGCTGTCGG CGCAACCCGT CCTGCTGGCG GCGCTGGCGC AGCGGTGCGC TGTCATGGTG
ACGGATCTGC CGATGCGGGG TGCGGACGTG CACTGGCAGG ACGATCGGGC GCGGCTCGAC
GAGCCGGTCG ATCCATTCGC CGCGGCGCGG GTCCTGCTGC CGGGTGCCTT GGCGGCGGCA
TCGCATCCGG TGGACCGGCA CCCGGCTGCG ATCGCCGAGC CTGTCTTGAT TGAAGGGTAT
GCGGTCAGCG ACCGGGAGGG CGGGCTCACG ATGGAGCAGG ACGGCCACCA GCTCGCTGTG
GCGGTCGACC GACTGCCCTC CTGCGGTCCG CTCACCCCGG AGTTGGTCGC CGCCTCGTCG
GCGTGTCTCG GGCTGCTGCG GTGGGACGCC GGTCGTTGGC TGTTGCAGCC GGTGGCGGTG
CAGGCCACCG TCAAGCGCAA GGTCGTCGCC GTGTACACCG GCGACTGGGC GTGCGGGGTC
ACCGACGCAA AGGTCGCGAA GGCCGACGCG AAGGCGGGCG ACGCCGTGAT GGTGTTGCGG
GAACGGGCGG GACGGTTGCT GCGCCGATGA
|
|---|
| Protein sequence | MRGTQIAALT AGHPAGLTDA LNLVAGVDAA LTRGLARVGE EDATALAGLA GALATTPLAN
LVGEAVDKII AGSGTQEYVA ALAGARSAVL GAVHDALLEQ VDVALGRSRA PWAPVPAAVP
VEASPALAGV RAWLSEVAVT GWRGVDHELV AGAGTAVEAV LAVPELRRLA VLLDGLAAEL
RACVPVAMMS QVPQRRWADL WARGVLLAQD TAAGDAALGV AERASGRLLP LAVDVHEHDT
AVQIQVHALL EPAGGGSPRL VRTAVGAAKV DSIVGPALWR LLSAQPVLLA ALAQRCAVMV
TDLPMRGADV HWQDDRARLD EPVDPFAAAR VLLPGALAAA SHPVDRHPAA IAEPVLIEGY
AVSDREGGLT MEQDGHQLAV AVDRLPSCGP LTPELVAASS ACLGLLRWDA GRWLLQPVAV
QATVKRKVVA VYTGDWACGV TDAKVAKADA KAGDAVMVLR ERAGRLLRR
|
|---|
| |