Gene Strop_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2010 
Symbol 
ID5058473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2280462 
End bp2281007 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content70% 
IMG OID640474276 
Productmetal-dependent phosphohydrolase 
Protein accessionYP_001158842 
Protein GI145594545 
COG category[R] General function prediction only 
COG ID[COG4341] Predicted HD phosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.211956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0444683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGCA TGCATCTCGT GTTTGACACC GAGAGTTTGC TGGGTTTCCT CGCCGGGCTC 
GACGGGGTGT ACGACGCACC CCCGCCGCTG GGGGATCCGG TGGACCTGCT GGCACACGGG
CTGCAGTGCG CGGCGGTCCT GCGGGACAAG CACCCTGATG ACCTCGGGCT CCAACTGGCG
GGACTGGTCC ATGACATAGG GCATGCCGTT GGCGACGACC CTGACCATGC CCGGGCCGGC
GCCGATGTCG TCCGCCCCGT CCTCGGCGCG CGGGTGGCGG ACCTCGTCGC ACTGCATGTC
CCGGCGAAGC GCTACCTCGC CTCGACCGAG CTCGACTATG AGCTGTCGGA GGCGAGCCGG
CTGAGCCTGG CGAGACAGGG CTCCGCGATG ACTGGCGAGG AACAGGAGAG GTTTCTCGCC
CATCCGGCGG CGGCCGACGC GGTGACGTTG CGTCGCGCCG ACGAGGCTGC CAAGATCGTC
GGGCGACGGG TGCCCGGTCT CGACGTGTGG GCGCCACGCC TGCGCACGTA CGCCAGCGGT
GTGTGA
 
Protein sequence
MPRMHLVFDT ESLLGFLAGL DGVYDAPPPL GDPVDLLAHG LQCAAVLRDK HPDDLGLQLA 
GLVHDIGHAV GDDPDHARAG ADVVRPVLGA RVADLVALHV PAKRYLASTE LDYELSEASR
LSLARQGSAM TGEEQERFLA HPAAADAVTL RRADEAAKIV GRRVPGLDVW APRLRTYASG
V