Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1999 |
Symbol | |
ID | 5058462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2269937 |
End bp | 2270632 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474265 |
Product | hypothetical protein |
Protein accession | YP_001158831 |
Protein GI | 145594534 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.76769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.037165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGG CCGGCATGTT CGCCGACTGC ACTCAGGCCG ACGTCGACGC CTGGTCCGTC GAGCACGCCA ACAGCAACCG GATCAACGTC CGGGCGTTCC TGCACTGGTC AGCCAGAACG AGGCTCACCC GCCGCTTCGA GCTCCCCGCG GCGCTGAGCC CCGGCAATGC CCCGATGCCC GACCGCCAGT GCACCGCGCT GCTCGGCCAG GTCCTCGCCG ACCACACCAC ACCGCTGCGC AGCCGGGTCG CCGCTGTGAT CCTGCTGCTC TACGCCCAAC CGCTCAGCCG GATCACCCAG TTCACCATCG ACGACGTCGT CCGCGACGGC GACGGGGTCC TGCTCCGGCT CGGAGACCCG CCATCACCAG CGCCCGAACC GGGCGCCACG CTGCTACTCG AGTACCTCGG ACAACGCACC AACATGGCCA CCGCCACGAA CCGCGAATCG CGTTGGCTAT TCCCCGGCCG TCGCGCCGGC CAGCCACTTC GCTCCGACAC ACTGTCCGCG CTGGTCCACG CCCTCGGCGT CCCCGCGACC GCCGGACGCG CCGCCGCGAT CCGCCAGCAC GTACTCGACC TGCCCGCCCC GATCATCGCC ACCGCACTCG GCTACCACCA GGTCACCACG GCCCGTCTCG CCACCGAGGC CGGCACCACC TGGCCCAACT ACGCCCCCGG TGACCGCAGC AAGTAG
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Protein sequence | MAQAGMFADC TQADVDAWSV EHANSNRINV RAFLHWSART RLTRRFELPA ALSPGNAPMP DRQCTALLGQ VLADHTTPLR SRVAAVILLL YAQPLSRITQ FTIDDVVRDG DGVLLRLGDP PSPAPEPGAT LLLEYLGQRT NMATATNRES RWLFPGRRAG QPLRSDTLSA LVHALGVPAT AGRAAAIRQH VLDLPAPIIA TALGYHQVTT ARLATEAGTT WPNYAPGDRS K
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