Gene Strop_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1999 
Symbol 
ID5058462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2269937 
End bp2270632 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID640474265 
Producthypothetical protein 
Protein accessionYP_001158831 
Protein GI145594534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.76769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.037165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG CCGGCATGTT CGCCGACTGC ACTCAGGCCG ACGTCGACGC CTGGTCCGTC 
GAGCACGCCA ACAGCAACCG GATCAACGTC CGGGCGTTCC TGCACTGGTC AGCCAGAACG
AGGCTCACCC GCCGCTTCGA GCTCCCCGCG GCGCTGAGCC CCGGCAATGC CCCGATGCCC
GACCGCCAGT GCACCGCGCT GCTCGGCCAG GTCCTCGCCG ACCACACCAC ACCGCTGCGC
AGCCGGGTCG CCGCTGTGAT CCTGCTGCTC TACGCCCAAC CGCTCAGCCG GATCACCCAG
TTCACCATCG ACGACGTCGT CCGCGACGGC GACGGGGTCC TGCTCCGGCT CGGAGACCCG
CCATCACCAG CGCCCGAACC GGGCGCCACG CTGCTACTCG AGTACCTCGG ACAACGCACC
AACATGGCCA CCGCCACGAA CCGCGAATCG CGTTGGCTAT TCCCCGGCCG TCGCGCCGGC
CAGCCACTTC GCTCCGACAC ACTGTCCGCG CTGGTCCACG CCCTCGGCGT CCCCGCGACC
GCCGGACGCG CCGCCGCGAT CCGCCAGCAC GTACTCGACC TGCCCGCCCC GATCATCGCC
ACCGCACTCG GCTACCACCA GGTCACCACG GCCCGTCTCG CCACCGAGGC CGGCACCACC
TGGCCCAACT ACGCCCCCGG TGACCGCAGC AAGTAG
 
Protein sequence
MAQAGMFADC TQADVDAWSV EHANSNRINV RAFLHWSART RLTRRFELPA ALSPGNAPMP 
DRQCTALLGQ VLADHTTPLR SRVAAVILLL YAQPLSRITQ FTIDDVVRDG DGVLLRLGDP
PSPAPEPGAT LLLEYLGQRT NMATATNRES RWLFPGRRAG QPLRSDTLSA LVHALGVPAT
AGRAAAIRQH VLDLPAPIIA TALGYHQVTT ARLATEAGTT WPNYAPGDRS K