Gene Strop_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1991 
Symbol 
ID5058454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2257036 
End bp2258181 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID640474257 
Productradical SAM domain-containing protein 
Protein accessionYP_001158823 
Protein GI145594526 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0387606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.206645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATCG TGACCCTACC GACCCCGGCG CTGCGCCCCG AGGACCGCGA CGGCTACGGG 
TTCGCCCGCC TGCCCGCCAA CGCCCACGAC GAGGCCCCGG AGCGCATCGA CCGCATCCCG
TACGGCCGGT TCCGCAATGT CTACCTGTAC ATCACCGAGC GCTGCCAGCT GCGCTGCGAA
CACTGCTACA TGGGCGAACG GCTGGACCGG GCGTTGAAGA TGCCCTTCGA CCAGATCATG
GCGACGCTCA CGACCTGGCG GCAGATGGGC GGGTCGAAAC TGACCATCCT CGGCGGCGAG
CCGACACTGC ACCCCGACTA CATCAAAGTG ATCCGCCACG CCAAGCAACT CGGCTACGAG
CACGTGATCA CGACCAGCAA CGGCCTGGAA CCGGCCATCC GTAAGTTCCG GCGCATGACC
CCCGACGACT TCGCCTACGT ACAGATCAGC CTCGACGGCG GCAGCCCGGA CAGCCACGAC
AGCGTACGCG GCACCGGCAC CTTTGACGAA GCCGTACGCA ACGTGCGGGA GCTGGTCGAG
CGTGGCTTCG ACGCGAGGAT CATCTGCACC GTCAACCGGG CCAATGCCGG GGACTGTCTG
CGGCTGCTCG ACCTTGCCGA CGAGATCGGG GTGTCGCTGG TCAAGTTCCA CGTCTTCTCG
GTCATCGGCT CCGGTCACGG CGCGGCCGAG TGGGGTATGC AGCCCATGGA GTGGATCGAG
TTCTACGAGC GGCTCGAAAC GGTCGCGCCC GGCTATCGGA CTCGGGTCTG GTACCAGCCC
ACATACGCCC GCCGCGAGCG GATGGCCCGC TACGCCGCCG ACGGCTACCG CGGCTGTATC
GGGCGGACCC TCGACCGGAT CTCCATCTTC CCGGACGGCC GGGCTTACGT GTGCAGCTTC
CTGTTCGACA CAGACCTGCA CTTCGCCAAC ATGACCGACG GGAAGATCGA ACTCAACCGC
AACGCCAACG AGTTCGACCT GTTCACCAGG GTCCTGTCCA CGTCGAGCTG CGGCGGCTGC
AAGGTCCCCG GATCGTGCGT CGGCGGCTGC CCGGCCGAGG AGCTGGTCAT GGGTGCCGCG
TCCTGCGCGG CCGAGCCGGA CATCGTGCCG GTCTGCCGCC TGTGGAAGGC CGACATCCGC
CGTTAG
 
Protein sequence
MTIVTLPTPA LRPEDRDGYG FARLPANAHD EAPERIDRIP YGRFRNVYLY ITERCQLRCE 
HCYMGERLDR ALKMPFDQIM ATLTTWRQMG GSKLTILGGE PTLHPDYIKV IRHAKQLGYE
HVITTSNGLE PAIRKFRRMT PDDFAYVQIS LDGGSPDSHD SVRGTGTFDE AVRNVRELVE
RGFDARIICT VNRANAGDCL RLLDLADEIG VSLVKFHVFS VIGSGHGAAE WGMQPMEWIE
FYERLETVAP GYRTRVWYQP TYARRERMAR YAADGYRGCI GRTLDRISIF PDGRAYVCSF
LFDTDLHFAN MTDGKIELNR NANEFDLFTR VLSTSSCGGC KVPGSCVGGC PAEELVMGAA
SCAAEPDIVP VCRLWKADIR R