Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1991 |
Symbol | |
ID | 5058454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2257036 |
End bp | 2258181 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640474257 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001158823 |
Protein GI | 145594526 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0387606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.206645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGATCG TGACCCTACC GACCCCGGCG CTGCGCCCCG AGGACCGCGA CGGCTACGGG TTCGCCCGCC TGCCCGCCAA CGCCCACGAC GAGGCCCCGG AGCGCATCGA CCGCATCCCG TACGGCCGGT TCCGCAATGT CTACCTGTAC ATCACCGAGC GCTGCCAGCT GCGCTGCGAA CACTGCTACA TGGGCGAACG GCTGGACCGG GCGTTGAAGA TGCCCTTCGA CCAGATCATG GCGACGCTCA CGACCTGGCG GCAGATGGGC GGGTCGAAAC TGACCATCCT CGGCGGCGAG CCGACACTGC ACCCCGACTA CATCAAAGTG ATCCGCCACG CCAAGCAACT CGGCTACGAG CACGTGATCA CGACCAGCAA CGGCCTGGAA CCGGCCATCC GTAAGTTCCG GCGCATGACC CCCGACGACT TCGCCTACGT ACAGATCAGC CTCGACGGCG GCAGCCCGGA CAGCCACGAC AGCGTACGCG GCACCGGCAC CTTTGACGAA GCCGTACGCA ACGTGCGGGA GCTGGTCGAG CGTGGCTTCG ACGCGAGGAT CATCTGCACC GTCAACCGGG CCAATGCCGG GGACTGTCTG CGGCTGCTCG ACCTTGCCGA CGAGATCGGG GTGTCGCTGG TCAAGTTCCA CGTCTTCTCG GTCATCGGCT CCGGTCACGG CGCGGCCGAG TGGGGTATGC AGCCCATGGA GTGGATCGAG TTCTACGAGC GGCTCGAAAC GGTCGCGCCC GGCTATCGGA CTCGGGTCTG GTACCAGCCC ACATACGCCC GCCGCGAGCG GATGGCCCGC TACGCCGCCG ACGGCTACCG CGGCTGTATC GGGCGGACCC TCGACCGGAT CTCCATCTTC CCGGACGGCC GGGCTTACGT GTGCAGCTTC CTGTTCGACA CAGACCTGCA CTTCGCCAAC ATGACCGACG GGAAGATCGA ACTCAACCGC AACGCCAACG AGTTCGACCT GTTCACCAGG GTCCTGTCCA CGTCGAGCTG CGGCGGCTGC AAGGTCCCCG GATCGTGCGT CGGCGGCTGC CCGGCCGAGG AGCTGGTCAT GGGTGCCGCG TCCTGCGCGG CCGAGCCGGA CATCGTGCCG GTCTGCCGCC TGTGGAAGGC CGACATCCGC CGTTAG
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Protein sequence | MTIVTLPTPA LRPEDRDGYG FARLPANAHD EAPERIDRIP YGRFRNVYLY ITERCQLRCE HCYMGERLDR ALKMPFDQIM ATLTTWRQMG GSKLTILGGE PTLHPDYIKV IRHAKQLGYE HVITTSNGLE PAIRKFRRMT PDDFAYVQIS LDGGSPDSHD SVRGTGTFDE AVRNVRELVE RGFDARIICT VNRANAGDCL RLLDLADEIG VSLVKFHVFS VIGSGHGAAE WGMQPMEWIE FYERLETVAP GYRTRVWYQP TYARRERMAR YAADGYRGCI GRTLDRISIF PDGRAYVCSF LFDTDLHFAN MTDGKIELNR NANEFDLFTR VLSTSSCGGC KVPGSCVGGC PAEELVMGAA SCAAEPDIVP VCRLWKADIR R
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