Gene Strop_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1988 
Symbol 
ID5058451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp2254933 
End bp2255427 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID640474254 
ProductNUDIX hydrolase 
Protein accessionYP_001158820 
Protein GI145594523 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0344946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.279217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCACCG CCTGCGGCGA CGCCTGTCGG GACGTCGCCG TGTTACGGTC CGCCGACAGC 
CGACTGCGGA AGGACGCGAA CATGTACCGG CCCCACGCCT TCCCGGTGTC CGTCAAGGGC 
GTCTGCGTCC GCGACGGCCG GGTCCTGCTG CTGCGTAACG AGCGCGAGGA ATGGGAACTC 
CCCGGCGGCA AGCTCGAACT CGGCGAGGAC CCGGCCGCCT GCGTCGGCCG GGAGATCAGC 
GAGGAGACCG GTTGGACGGT GCGGGTCGGC CCGATCCTCG ACTCCTGGCA GTACCACATC 
CGCGACGGCA TCGACGTGCT GATCGTGACC TACGGCTGCT TCGTCGACGA CGACTCGCCG 
ATCACGGTGA GCTCCGAGCA CAAGGAAGCC CGCCTGTTCG CCGCCGACGA GATCGCGGCC 
CTACCCATGC CCGACGGGTA CCGGCGCTCG ATCCACGACT GGTTCACCCG GCTCGAAACA 
CCGGTAAGCG GATAG
 
Protein sequence
MPTACGDACR DVAVLRSADS RLRKDANMYR PHAFPVSVKG VCVRDGRVLL LRNEREEWEL 
PGGKLELGED PAACVGREIS EETGWTVRVG PILDSWQYHI RDGIDVLIVT YGCFVDDDSP 
ITVSSEHKEA RLFAADEIAA LPMPDGYRRS IHDWFTRLET PVSG