Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1979 |
Symbol | |
ID | 5058442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2245214 |
End bp | 2246878 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474246 |
Product | regulator of chromosome condensation, RCC1 |
Protein accession | YP_001158812 |
Protein GI | 145594515 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.158856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.33934 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGG GACTCTGCCC GTGGGTAGTC CGTGGCGCTG GAGCATGCGG GGTGGTGCGC GTCCTCGCTG GGTGGCTCTT TCTCGCGTTG GCGGTGACGG TCACGCAGGC ACTCGGCACA TGGCCCGCGA TCGCGCAGTC CGGGCTGTCG TCGTCTGTCG TCGTGTCGGA CACCGTCCTC GCCTGGGGCG ACAACTTCTC CGGCCAGTTG GGCGACGGGA CCACCACCGC CCGCAGCACA CCTGTGACGG TCGGCCTACC CGCAGGCACC ACGATCACCG CCCTCGCCGC CGGCGGCTCC CATAGTCTGG CGCTCACCGA CACTGGCGTC GTCCTCGCCT GGGGTAGCAA CTCGCGTGGC CAGTTGGGCG ACGGGACCAC CACCGACCGC AGCACACCTG TGACGGTCGG CCTACCCGCA GGCACCACGA TCACCGCCCT CGCCGCCGGC CGCCGCCATA GTCTGGCGCT CACCGACACT GGCGCCGTCC TCGCCTGGGG TAGCAACTCG AATGGCCAGT TAGGCGACGG GACCACCACC GCCCGCAGCA CACCTGTGAC GGTCGGCCTA CCCGCAGGCA CCACGATCAC CGCCCTCGCC GCCAGCACCT ACAGTCTGGC GCTCACCGAC ACTGGCGCCG CCCTCGCCTG GGGTAGCAAC TCGCGTGGCC AGTTGGGCGA CGGGACCACC ACCGACCGCA GCACACCTGT GACGGTCAGC CTACCCGCAG GCACCACAAT CACCGCCCTC GCCGCCAGCT ACGACCACAG TCTGGCGCTC ACCGACACTG GCGCCGTCCT CGCCTGGGGT AGCAACTCGA ATGGCCAGTT AGGCGACGGG ACCACCACCA ACCGCAGCAC ACCTGTGACG GTCGGCCTAC CCGCAGGCAC CACGATCACC GCCCTCGCCG CCGGCCGCTC CCATACTTTG GTGCTCACCT CCGCTGGCGC CGTCCTCGCC TGGGGTAGCA ACTCGAATGG CCAGTTAGGC GACGGGACCA CCACCGACCG CAGCACACCT GTGACGGTCG GCCTACCCGC AGGCACCACG ATCACCGCCC TCGCCGCCGG CTACTACCAC AGCCTGGCGC TCACCGACAC TGGCGCCGTC CTCGCCTGGG GTGGCAACTC GTATGGCCAG TTGGGCGACG GGACCACCAC CGACCGCAGC ACACCTGTGA CGGTCGGCCT ACCCGCAGGC ACCACGATCA CCGTACTCGT CAGCATGGAC AACCACGGCA TGGCCCTGGT CGCACCACCA ACGTCCACCA CCACATTGCA GGTCACACCG GCAAACCCGG CAGCGGATCA GGATGTCACC CTCACCGCCA CGGTCACCTG CACCACCGAC ACCCCCACCG GAACCATCAC CTTCCGCACC GGCACCACCA CCCTCGCCGT CGTACCCCTC ACCACCAACG CCACCCACAC CACCACACTG CCCGCAGGCA CCCACACCCT CACCGCCAAC TACACCAGCA CCAACACCTG CCCCAACAGC CAATCCCCAC CCATCAGCAT CACCATCGCC CCACCACCCG ACGAGCCCGA CCTGCCCATC ACCGGCCCCA ACCTGCCCAC GACCATCGGC GCCGCCACCC TGCTCACCCT CACCGGCGCC ACCCTCATCC ACCTCACTCA CCGACGCCGA CCAACCAACC CGTGA
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Protein sequence | MMQGLCPWVV RGAGACGVVR VLAGWLFLAL AVTVTQALGT WPAIAQSGLS SSVVVSDTVL AWGDNFSGQL GDGTTTARST PVTVGLPAGT TITALAAGGS HSLALTDTGV VLAWGSNSRG QLGDGTTTDR STPVTVGLPA GTTITALAAG RRHSLALTDT GAVLAWGSNS NGQLGDGTTT ARSTPVTVGL PAGTTITALA ASTYSLALTD TGAALAWGSN SRGQLGDGTT TDRSTPVTVS LPAGTTITAL AASYDHSLAL TDTGAVLAWG SNSNGQLGDG TTTNRSTPVT VGLPAGTTIT ALAAGRSHTL VLTSAGAVLA WGSNSNGQLG DGTTTDRSTP VTVGLPAGTT ITALAAGYYH SLALTDTGAV LAWGGNSYGQ LGDGTTTDRS TPVTVGLPAG TTITVLVSMD NHGMALVAPP TSTTTLQVTP ANPAADQDVT LTATVTCTTD TPTGTITFRT GTTTLAVVPL TTNATHTTTL PAGTHTLTAN YTSTNTCPNS QSPPISITIA PPPDEPDLPI TGPNLPTTIG AATLLTLTGA TLIHLTHRRR PTNP
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