| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1960 |
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| Symbol | |
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| ID | 5058423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2226900 |
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| End bp | 2228336 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640474231 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001158797 |
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| Protein GI | 145594500 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0558054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.587362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGC TACTGCTGCT CGACTATCAA CACCTGACGG ACCGACATTC GCATCTTCGC
CAAGGAGGGG CTGACCCCGT GGTGGACGTG GCAGTGGTGC AGACCAGCGA GCTCGGTGAC
CGCAGCTACA TCGCCCACGA CGGGCACGTC GCGATCGTGG TTGATCCGCA GCGTGACCTG
GACCGCTTGC AGGCGGTTCT CAACGAGCGC GGGCTGCGCT GCGCGATGGT GCTGGAGACG
CACATCCACA ACGACTACGT CTCCGGCGGC CTGCAACTGG CGCATCAGCA CAACGCGCCG
TACGCGGTCA ACGCCGCCGA CGAGGTGGCG TTCGAGCGGC ACGGCGTCGC TGATGGTGAC
GAGCTGTCGG TGGGAGGCAT GCGAGTGCGG GTGGTTGCGA CCCCGGGGCA CACCGATACT
CACCTGGCCT TCGTGATTAG CGGTGGCCCC GGGCCGGCGG CAGTATTCAC CGGCGGCTGC
CTGCTCTACG GCAGTGTTGG GCGCACCGAC CTGGTCGACC CGGCCCGCAC GGAGGAACTG
ACCCGGGCCC AGTATCGCTC GGCACACCGC CTCGTCGACC TGCTCGACGA CGACGCCGGG
ATCTTTCCGA CCCACGGATT CGGTAGCTTC TGCTCCGCCG GATCCAGGTC CGGCGGCGAG
GACAGCACCG TCGGGCAGGA GAAAGCCCGC AACGACGCGT TCACCGCGAC GAACGAGGAC
ACATTCGTGG CGCAGCTGGT CGCCGGTCTC ACCGCCCACC CGGCCTACTA CGCGTACATG
GGTGCCCGTA ACCGTGCTGG CGCCGGACCT GTCGACCTGT CCACACCGCA GCAGGTCAGT
CCGACCGAAC TGCGGGAACG GATCAGCGCC GGGGAGTGGG TGGTCGATCT GCGCGACCGT
ACCGCGTACG CCGCCGAGCA CCTCGTCGGC ACCATCAGTA TCGCCCTGAG CCAGCAGTTC
GCCACGTACC TCGGCTGGCT CATTCCCTGG GGCATGCCGC TCACCCTGAT CGGTGAGACC
CCGCAGCAGA TCACCGACGC GCAACGCCAA CTCGTGCGCA TCGGCATCGA CCGGCCGGAC
GGCGCTGCCA CGGGCAAGCT GCGCAACCTG GCCGACGGCG TGGCCACCCG CAGCTACCGG
CGGATCACCT TCGCTGGACT CGCCGCAGCC CAGCAGGCCG GGGAGGCCCT GACCCTGCTG
GACGTGCGGC GCGCCGACGA ACGCGCCCTT GGCGCGATTC CCGTCTCGGT GCACATCCCG
CTGCACTGCC TGCTGGATCG GCTCGGTGAC GTTCCACCCG GCCCGCTTGC GGTGCACTGC
GCCAGCGGGT TCCGGGCGGG CATCGCCGCC AGCCTGCTCG ACCGTGCCGG CCACGACGTC
GTCCACATCG ACGACGAGTA CGCCGTCGCT GTCACCTCCG GTCAGGCCAC CGGCTGA
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| Protein sequence | MRLLLLLDYQ HLTDRHSHLR QGGADPVVDV AVVQTSELGD RSYIAHDGHV AIVVDPQRDL
DRLQAVLNER GLRCAMVLET HIHNDYVSGG LQLAHQHNAP YAVNAADEVA FERHGVADGD
ELSVGGMRVR VVATPGHTDT HLAFVISGGP GPAAVFTGGC LLYGSVGRTD LVDPARTEEL
TRAQYRSAHR LVDLLDDDAG IFPTHGFGSF CSAGSRSGGE DSTVGQEKAR NDAFTATNED
TFVAQLVAGL TAHPAYYAYM GARNRAGAGP VDLSTPQQVS PTELRERISA GEWVVDLRDR
TAYAAEHLVG TISIALSQQF ATYLGWLIPW GMPLTLIGET PQQITDAQRQ LVRIGIDRPD
GAATGKLRNL ADGVATRSYR RITFAGLAAA QQAGEALTLL DVRRADERAL GAIPVSVHIP
LHCLLDRLGD VPPGPLAVHC ASGFRAGIAA SLLDRAGHDV VHIDDEYAVA VTSGQATG
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